EY720610

Overview
NameEY720610
Unique NameEY720610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  298 GTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGGLRVGGILNMTRXIGDHNLK---------PWVIAEPEVTFMTRS-EDDEFLILXSDGLWDVMSSDDAVKWARYEL 675
            G+TA+  ++SP      NCGDSR +L R ++    T DHK     E  RI N GG ++     RV G L ++R +GD + K           V  EPEV  + RS EDD+F+IL  DG+WDVM +++   + R  L
Sbjct:  126 GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL 258          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  298 GTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGGLRVGGILNMTRXIGDHNLK---------PWVIAEPEVTFMTRS-EDDEFLILXSDGLWDVMSSDDAVKWARYEL 675
            G+TA+  ++SP      NCGDSR +L R ++    T DHK     E  RI N GG ++     RV G L ++R +GD + K           V  EPEV  + RS EDD+F+IL  DG+WDVM +++   + R  L
Sbjct:  126 GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL 258          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.045e-14
Identity = 52/136 (38.24%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  298 GTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGGLRVGGILNMTRXIGDHNLK---------PWVIAEPEVTFMTRS-EDDEFLILXSDGLWDVMSSDDAVKWARYEL 675
            G+TA+  ++SP      NCGDSR +L R ++    T DHK     E  RI N GG ++     RV G L ++R +GD + K           V  EPEV  + RS EDD+F+IL  DG+WDVM +++   + R  L
Sbjct:  126 GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRL 258          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.782e-14
Identity = 54/176 (30.68%), Postives = 82/176 (46.59%), Query Frame = 1
Query:  199 NDGWHRRWEAALCRSYERADDVFKDNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQII---------------NWGGLRVGGILNMTRXIGDHNLK---------PWVIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDAV 654
            N+GW    +A +C +             AP   G+TA V ++   Q+I  + GDSR VLSR  QA  L+VDHK D E E  R+ N GG  +                WG     G ++++R IGD   K           +   P++  M  ++D EFL++ ++GLW  M++ + V
Sbjct:  163 NNGWMYFIKAGVCANLSPFPQA---TYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVV 335          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14
Identity = 56/148 (37.84%), Postives = 76/148 (51.35%), Query Frame = 1
Query:  226 AALCRSYERADDVFKDNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVL-SRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGG--LRVGGILNMTRXIGDHNLKPWVIAEPEVTFMTRSEDDE--FLILXSDGLWDVMSSDDAV 654
            AA+  +Y   D  F    +     G  A  A++   ++  SN GD R VL SRG  A  LT DH   REDE  RI + GG +   G    RV   L ++R  GD  +K WV  EPE   ++ + D +  FL+L SDGLW  +S+ +AV
Sbjct:  228 AAIRAAYLTTDSEFLSQGVRG---GACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIESTGGYVSCGGSGVWRVQDSLAVSRAFGDAGVKQWVTCEPETARVSLAADGDCRFLVLASDGLWCKVSNQEAV 372          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.328e-14
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 1
Query:  223 EAALCRSYERADDVFKDNSLAPYSVGTTALVAIL-SPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGG--LRVGGILNMTRXIGDHNLKPWVIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDAVKWAR 666
            + A+ ++YE+ D     ++      G+TA+ AIL +  ++  +N GDSR VL +G + I ++ DH  D   E + I N GG + N  G   RV G L ++R  GD NLK  + +EP++         E L+L SDGLW VM++ + V  A+
Sbjct:  102 DRAIIKAYEKTDQAILSHTPDLGQGGSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDH--DPNVERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAK 250          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.040e-14
Identity = 46/122 (37.70%), Postives = 65/122 (53.28%), Query Frame = 1
Query:  286 PYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGGLRVGGILNMTRXIGDHNLKPWVIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDA 651
            P SV   ++       ++  +N GDSR+VL R   +I LT DHK     E+ R+   GG I+     RV G+L +TR +GD      V+  P  T +  + +D+FLIL  DGLWDV+   DA
Sbjct:  126 PDSVSDDSMDLAQHQRKLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMK---SRVNGMLAVTRSLGDKFFDSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDA 244          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.970e-14
Identity = 56/200 (28.00%), Postives = 98/200 (49.00%), Query Frame = 1
Query:  223 EAALCRSYERADDVF-KDNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGGQIINWGGLRVGGILNMTRXIGDHNLKPWVIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDAVKWARYELRRRRKLPEKGDTPSSQACGAA*RLVKIAYDAFSNHHISGVIVDLKAPR 819
            E AL  ++ R D +F +         GTT + A+++   +  +  GDS+V+L +  Q + L   H+ +R+DE ARI   GG + +    RV G L ++R IGD   KP+V  E +      +  +++L+L  DG +DV+   + V   +  L R++                A  LV  A +  S+ +I+ ++V L+ P+
Sbjct:  228 EGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKPYVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQ----------GSGLRVAEELVAAARERGSHDNITVMVVFLRDPQ 417          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 63/184 (34.24%), Postives = 87/184 (47.28%), Query Frame = 1
Query:  157 LHLMVAEEWGREAGNDGWHRRWEAALCRSYERAD-DVFKDNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSR------GKQAIPLTVDHKLDREDEVARITNGGGQIIN----------WGGLRVGGILNMTRXIGDHNLKPW-VIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDAV 654
            L LM A    R++G D     W  A  R+Y+  D D+    SL  +  G+TA+  +     +  +N GDSR VL        G  A+ LTVD K D   E  RI    G++            W        L M R  GD  LK + VI+ PE    + +E D+F+IL SDG+WDV+S+ +AV
Sbjct:  108 LRLMSA---ARDSGADMPAAAWRKAFARAYKAMDKDLRSHPSLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSREATGGGMVAVQLTVDLKPDVPSEAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVWDVLSNQEAV 288          
BLAST of EY720610 vs. ExPASy Swiss-Prot
Match: P2C12_ORYSJ (Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.509e-13
Identity = 60/163 (36.81%), Postives = 82/163 (50.31%), Query Frame = 1
Query:  220 WEAALCRSYERADDVFK--DNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGK-----QAIPLTVDHKLDREDEVARITNGGGQIINW----GGLRV------GGILNMTRXIGDHNLKPW-VIAEPEVTFMTRSEDDEFLILXSDGLWDVMSSDDAV 654
            W  A   ++   D   K   N    +S GTTA+ AI     +I +N GDSR VL+        QA+ LTVDHK    +E ARI   GG++       G +RV         L M R +GD  LK   VI  PEVT    +  D F++L +DG+WDV+S+++ V
Sbjct:  152 WRQACASAFAAMDGELKLQPNLDCAFS-GTTAVCAIKQGRDLIIANLGDSRAVLATMSDTGYLQAVQLTVDHKPSVPEEAARIKRSGGRVFGLKDEPGVMRVWLPGENSPGLAMARSLGDMRLKRHGVIPAPEVTSRRVTGADLFMVLATDGVWDVLSNEEVV 313          
The following BLAST results are available for this feature:
BLAST of EY720610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
PPM1A_RABIT1.045e-1438.24Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE1.045e-1438.24Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
PPM1A_HUMAN1.045e-1438.24Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
P2C20_ORYSJ1.782e-1430.68Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C77_ORYSJ2.328e-1437.84Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
P2C41_ORYSJ2.328e-1435.10Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
PP2C1_YEAST3.040e-1437.70Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
PPM1F_HUMAN3.970e-1428.00Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C64_ORYSJ8.845e-1434.24Probable protein phosphatase 2C 64 OS=Oryza sativa... [more]
P2C12_ORYSJ1.509e-1336.81Probable protein phosphatase 2C 12 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-H05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720610 ID=EY720610; Name=EY720610; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCGGACGCGTGGGTTAGAAAATAAGGGAAAGCAAAGCAGC
CGACCACACTGAAAAAAATGGTGAAACAGAAATCAAAGTTACGTCCTTTT
CAAGAAAATGAAAAGCCCCAGAGACCAAAAAGGTAAGTAAATATTGTGCA
AATGAGCTCCATTTAATGGTAGCGGAAGAATGGGGGAGAGAAGCTGGTAA
TGATGGATGGCATAGGAGGTGGGAGGCTGCACTGTGCAGGTCTTATGAGA
GGGCAGATGATGTTTTCAAGGACAATTCATTAGCACCCTACTCAGTTGGA
ACAACAGCTTTGGTTGCAATTCTGTCACCCTGCCAGATCATTGCTTCCAA
CTGCGGTGACTCCAGAGTTGTTCTTTCTCGCGGGAAGCAAGCAATCCCCT
TAACAGTTGATCACAAGCTTGATAGAGAAGATGAAGTAGCAAGAATTACC
AATGGAGGTGGGCAGATTATCAACTGGGGTGGTTTAAGGGTGGGGGGGAT
TCTTAATATGACAAGAGNCATAGGTGATCACAATTTGAAACCATGGGTTA
TTGCAGAGCCTGAAGTAACTTTCATGACCAGGAGTGAAGATGATGAATTT
CTGATTTTGGNCAGTGATGGGCTATGGGATGTNATGTCCAGTGATGATGC
AGTAAAGTGGGCTCGCTATGAACTGAGAAGGCGACGTAAGCTGCCGGAAA
AGGGTGATACTCCCTCCTCTCAAGCTTGTGGTGCTGCTTGAAGACTCGTT
AAGATAGCTTATGATGCATTCAGTAACCACCACATCTCTGGTGTTATTGT
TGACCTGAAAGCTCCTAGGAGTAGGTCCCTGCAGAACACTGAAAAAAGGG
ATTGAAAACAAATG
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