EY720546

Overview
NameEY720546
Unique NameEY720546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: ANGR_VIBAN (Protein angR OS=Vibrio anguillarum GN=angR PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.540e-16
Identity = 60/213 (28.17%), Postives = 97/213 (45.54%), Query Frame = 2
Query:   77 MLSALRNLVTALQQAPTTPLHQVSILPPAERHQVLVGFNATARDYPAGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL-----------NDLA-----ALNLATQPAHNPNLAQSAESVAYIMYTSGSPGAPMGVKVPHR 667
            ML +  +L+  L Q        +  L P  +  +    N         + +H  F     ++P A+A++HG  SL Y  L   A   A  L + GVK GD V + + + I  +V+ L IL   A+YVP+ ++ P+ER+  + Q +    +L           NDL         + ++P  +P     ++  AYI+YTSGS G P GV + H+
Sbjct:  405 MLHSYTDLLDLLSQKDVNWAQPLPTLLPKHQESIRNKINQQGDLELTKELLHQRFFKNVESTPNALAIIHGQESLDYITLASYAKSCAGALTEAGVKSGDRVAVTMNKGIGQIVAVLGILYAGAIYVPVSLDQPQERRESIYQGAGINVILINESDSKNSPSNDLFFFLDWQTAIKSEPMRSPQDVAPSQP-AYIIYTSGSTGTPKGVVISHQ 616          
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: HTS1_COCCA (HC-toxin synthetase OS=Cochliobolus carbonum GN=HTS1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.185e-14
Identity = 74/242 (30.58%), Postives = 109/242 (45.04%), Query Frame = 2
Query:   50 VDVQRVGDYMLSALRNLVTALQQAPTTPLHQVSIL--PPAERH-QVLVGFNATARDYP--AGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDS--VVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL------NDLAALNLATQ--PAHNPNLAQ------------------SAESVAYIMYTSGSPGAPMGVKVPHRAIS 676
            ++VQ +   M     NL T  + A   P  +++ L    A  H + L  +N+  +D P  A   VH L E  A + P   A+V     LSY  ++  A+ LA  +    +    S  V I L RS   +VS LA+LK    ++P+D++ P  R   ++++S AK VL      N LA L+  T+  P     L Q                     S AY++YTSG+ G P GV + HRA S
Sbjct: 2911 IEVQLLERLMEQFGHNLQTLCRAASFDPGKRIAELMDDTATTHLRTLFSWNSRVKDSPDVAAIAVHKLLEETAQSQPAESAIVAHDGQLSYMQMDRCADVLARQIRKTNMISAQSPFVCIHLLRSATAVVSMLAVLKAGGAFMPVDISQPRSRLQNLIEESGAKLVLTLPESANALATLSGLTKVIPVSLSELVQQITDNTTKKDEYCKSGDTDPSSPAYLLYTSGTSGKPKGVVMEHRAWS 3152          

HSP 2 Score: 69.707 bits (169), Expect = 2.409e-11
Identity = 54/229 (23.58%), Postives = 102/229 (44.54%), Query Frame = 2
Query:   74 YMLSALRNLVTALQQAPTTPLHQVSILPPAERHQVLVGFNATARDYP-AGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL-----NDLAAL-NLATQ-----------------------PAHNPNLAQSAESVAYIMYTSGSPGAPMGVKVPHRA 670
            Y  S    +   L +    P   ++ LP    H   +  +     +P A + +H  F  + +  P+  A+     SL+Y +L+  + RL+ +L+  G+K G  + I   +S+  +V+ LA+++   V+V L+   PE R + +++   A+ +L     + + AL N++TQ                       P H P +  + +   Y+++TSGS G P G    H+A
Sbjct: 1771 YATSIASTVAHILSELVHDPYRALNTLPIVSEHDTAIIRSWNDHLFPPATECIHETFSRKVVEHPQREAICSWDGSLTYAELSDLSQRLSIHLVSLGIKVGTKIPICFEKSMWTIVTILAVVQAGGVFVLLEPGHPESRLSGIIKQVQAELLLCSPATSRMGALQNISTQMGTEFKIVELEPEFIRSLPLPPKPNHQPMVGLNDD--LYVVFTSGSTGVPKGAVATHQA 1997          
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: MBTB_MYCSS (Phenyloxazoline synthase mbtB OS=Mycobacterium sp. (strain MCS) GN=mbtB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.845e-14
Identity = 60/186 (32.26%), Postives = 90/186 (48.39%), Query Frame = 2
Query:  152 LPPAERHQVLVGFNATARDYPAGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL-------NDLAALNLAT-----QPAHNPNLAQ-SAESVAYIMYTSGSPGAPMGVKVPHRA 670
            +PPA+R  V    N T     +   +H  F   A  +P+A AV+    +L+Y +L  R   +   L   G+KPGD+V +  P+  D + + LAI    AVYVP+  + P +R   ++Q +  +  L         L AL +A         H    A    + VAY+++TSGS GAP GV+V H A
Sbjct:  527 VPPAQR-AVRDAVNDTGARR-SDDALHDGFFRTAAHTPDATAVIGSTGTLTYAELRERVLAVTGALQVAGIKPGDTVAVMGPKCADQVTALLAIHAAGAVYVPIGADQPADRADSILQTAGVRMALACGDEPPTFLPALTIAEAVRVGSRVHGVTPATVEPDRVAYVLFTSGSTGAPKGVEVTHAA 710          
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: MBTB_MYCPA (Phenyloxazoline synthase mbtB OS=Mycobacterium paratuberculosis GN=mbtB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.488e-13
Identity = 54/172 (31.40%), Postives = 80/172 (46.51%), Query Frame = 2
Query:  212 PAGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL--------NDLAALNLATQPAHNPNLAQSA------ESVAYIMYTSGSPGAPMGVKVPHRAISRLV 685
            P+G+ +H  F  QA   P+A AV  G   LSY  L  +A  +A  L   G   GD+V +  P+S + + + L IL   A Y+P+  + P +R   ++Q    +  L          +  L LA      P  A+ A        +AY+++TSGS G P GV+V H A    V
Sbjct:  548 PSGEALHDRFFRQAERQPDAPAVFAGSGDLSYAQLRDQALAVAAALRAAGAGAGDTVAVVGPKSAEQIPAVLGILSVGAAYLPIGADQPRDRAERILQSGRVRLALVCGGRQLSLPVPGLVLADVLGGAPADAEIACARVDPGELAYVLFTSGSTGEPKGVEVTHDAAMNTV 719          
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: MBTB_MYCTU (Phenyloxazoline synthase mbtB OS=Mycobacterium tuberculosis GN=mbtB PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12
Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 2
Query:  146 SILPPAERHQVLVGFNATARDYPAGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL-------------NDLAALNLATQPAHNPNLAQSAESVAYIMYTSGSPGAPMGVKVPHRAISRLVIT 691
            S LP A+R         TA   P+ + +H  F  QA   P+A AV      LSY  L  +A+ +A  L   G++ GD+V +  P++ + + + L IL    VY+P+ V+ P +R   ++        L               L A  LA  PA          ++AY+++TSGS G P GV+V H A    V T
Sbjct:  529 SALPAAQRAVRAALNGRTAA--PSTEALHDGFFRQAQQQPDAPAVFASSGDLSYAQLRDQASAVAAALRAAGLRVGDTVAVLGPKTGEQVAAVLGILAAGGVYLPIGVDQPRDRAERILATGSVNLALVCGPPCQVRVPVPTLLLADVLAAAPAEFVPGPSDPTALAYVLFTSGSTGEPKGVEVAHDAAMNTVET 721          
BLAST of EY720546 vs. ExPASy Swiss-Prot
Match: MBTB_MYCBO (Phenyloxazoline synthase mbtB OS=Mycobacterium bovis GN=mbtB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.668e-12
Identity = 59/195 (30.26%), Postives = 88/195 (45.13%), Query Frame = 2
Query:  146 SILPPAERHQVLVGFNATARDYPAGKTVHALFEAQALASPEAVAVVHGHASLSYRDLNLRANRLAHYLIDQGVKPGDSVVIALPRSIDLLVSQLAILKCAAVYVPLDVNAPEERQAFMVQDSHAKHVL-------------NDLAALNLATQPAHNPNLAQSAESVAYIMYTSGSPGAPMGVKVPHRAISRLVIT 691
            S LP A+R         TA   P+ + +H  F  QA   P+A AV      LSY  L  +A+ +A  L   G++ GD+V +  P++ + + + L IL    VY+P+ V+ P +R   ++        L               L A  LA  PA          ++AY+++TSGS G P GV+V H A    V T
Sbjct:  529 SALPAAQRAVRAALNGRTAA--PSTEALHDGFFRQAQQQPDAPAVFASSGDLSYAQLRDQASAVAAALRAAGLRVGDTVAVLGPKTGEQVAAVLGILAAGGVYLPIGVDQPRDRAERILATGSVNLALVCGPPCQVRVPVPTLLLADVLAAAPAEFVPGPSDPTALAYVLFTSGSTGEPKGVEVAHDAAMNTVET 721          
The following BLAST results are available for this feature:
BLAST of EY720546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ANGR_VIBAN5.540e-1628.17Protein angR OS=Vibrio anguillarum GN=angR PE=2 SV... [more]
HTS1_COCCA5.185e-1430.58HC-toxin synthetase OS=Cochliobolus carbonum GN=HT... [more]
MBTB_MYCSS8.845e-1432.26Phenyloxazoline synthase mbtB OS=Mycobacterium sp.... [more]
MBTB_MYCPA7.488e-1331.40Phenyloxazoline synthase mbtB OS=Mycobacterium par... [more]
MBTB_MYCTU1.668e-1230.26Phenyloxazoline synthase mbtB OS=Mycobacterium tub... [more]
MBTB_MYCBO1.668e-1230.26Phenyloxazoline synthase mbtB OS=Mycobacterium bov... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-H09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720546 ID=EY720546; Name=EY720546; organism=Citrus sinensis; type=EST; length=866bp
CCACGATCTTGGTGTGGGCTTTGCGCTGACGGTGCAAGGCGTAGCCGAAG
TGGATGTGCAGCGTGTCGGCGACTATATGCTCAGTGCCTTGCGCAACCTG
GTGACGGCGCTGCAACAGGCGCCGACTACGCCGCTGCATCAAGTGTCGAT
CCTGCCACCTGCCGAGCGGCATCAAGTGTTGGTGGGTTTCAACGCCACCG
CCCGCGACTACCCGGCCGGGAAAACCGTTCACGCTCTCTTCGAAGCCCAG
GCCCTGGCCAGCCCGGAAGCCGTGGCGGTGGTGCACGGCCATGCGTCGCT
GAGTTACCGCGATCTCAACCTGCGGGCCAATCGCCTGGCCCACTATTTGA
TCGATCAAGGCGTAAAGCCGGGGGACAGCGTGGTCATCGCGCTGCCACGC
TCCATCGACCTGTTGGTCAGCCAGTTGGCGATCCTCAAGTGTGCGGCGGT
CTATGTGCCGCTGGACGTCAACGCGCCTGAAGAGCGCCAGGCGTTCATGG
TGCAGGACAGCCATGCCAAACACGTGCTGAATGACCTCGCTGCGCTGAAC
CTTGCGACGCAGCCTGCGCATAACCCGAACCTCGCCCAGTCGGCGGAAAG
CGTGGCGTACATCATGTACACCTCCGGCTCCCCGGGGGCACCAATGGGGG
TAAAGGTTCCCCATCGGGCCATCTCCCGATTGGTGATCACAACGGGGAGC
CCGACTTCCATCACCTGGGACCGGGTGGCCTTGGCCTCGAGCCCGGCGTC
CCACGCCAGAACCCACCAAGTCTGGACACGATAGACCAAGGCCCTGGGTT
AGCGGCGGGGGAAGACAGGGTTGTGCGACCGCGGCAAATAGAAGACGGGT
GGATGAAGAAAGGCTA
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