EY720493

Overview
NameEY720493
Unique NameEY720493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: ACUC_STAAN (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain N315) GN=acuC PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.594e-20
Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  189 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAI----NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHKVRR-LFSXYRGYT 797
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A   +L   H  DYV  ++  +     +   + K++ + ++    +G F     ++   VGGA+ L   +    +    +  GGLHHA+   ASGFC  NDI +    + K++ +RVL +D D HHG+G + +FY  + V T S H+  + LF     YT
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYT 210          

HSP 2 Score: 22.7126 bits (47), Expect = 3.594e-20
Identity = 10/30 (33.33%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  775 FPXTGDIRDIGYSKGKFYSLNVPLDDGIDD 864
            FP +G   + G   G  +++NVPL+   +D
Sbjct:  203 FPGSGHYTERGEDIGYGHTVNVPLEPYTED 232          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: ACUC_STAAM (Acetoin utilization protein acuC OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=acuC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.594e-20
Identity = 62/209 (29.67%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  189 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAI----NWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHKVRR-LFSXYRGYT 797
            K  Y Y  ++  Y +   HP    R+++T  LL +  LL   Q+++P  A   +L   H  DYV  ++  +     +   + K++ + ++    +G F     ++   VGGA+ L   +    +    +  GGLHHA+   ASGFC  NDI +    + K++ +RVL +D D HHG+G + +FY  + V T S H+  + LF     YT
Sbjct:    7 KTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISED--EAKKYGLNDE---ENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYT 210          

HSP 2 Score: 22.7126 bits (47), Expect = 3.594e-20
Identity = 10/30 (33.33%), Postives = 17/30 (56.67%), Query Frame = 1
Query:  775 FPXTGDIRDIGYSKGKFYSLNVPLDDGIDD 864
            FP +G   + G   G  +++NVPL+   +D
Sbjct:  203 FPGSGHYTERGEDIGYGHTVNVPLEPYTED 232          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDA5_ARATH (Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.913e-16
Identity = 63/202 (31.19%), Postives = 96/202 (47.52%), Query Frame = 3
Query:  183 KRKVCYFYDPEVGNYYY--GQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL--CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            +RKV   YD  +  +    G+ HP  P RIR+    L   G+ Q   VL    A ++ L   H  D+V+ ++SI+  T+Q   R+ +  +      +  G        AG  V  A K+  G   C  AI    G HHA+  EA GFC  N++ +A   LL +      +++L VD D+HHG G ++ F+   RV+  S H+
Sbjct:   24 QRKVGLIYDETMCKHDTPDGEDHPECPDRIRVIWEKLQLAGVSQRCVVLGSSKAEDKHLQLVHTKDHVNLVKSIS--TKQKDYRRNRIASQLNSIYLNGGSSEAAYLAAGSVVKLAEKVAEGELDCGFAIVRPPG-HHAEADEAMGFCLFNNVAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHR 222          

HSP 2 Score: 26.1794 bits (56), Expect = 9.913e-16
Identity = 12/37 (32.43%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  751 HSIRSGDYFPX--TGDIRDIGYSKGKFYSLNVPLDDG 855
            H    G ++P    GD   +G   G+ +++NVP D G
Sbjct:  221 HRHEYGGFYPAGDDGDYNMVGEGPGEGFNINVPWDQG 257          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDA8_ARATH (Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.206e-15
Identity = 53/195 (27.18%), Postives = 85/195 (43.59%), Query Frame = 3
Query:  204 YDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLN--------HGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGEGVEETFYTTDRVMTVSFH 758
            YDP  G     + HP    R+R   ++L    +  ++      PA   +L  FH  +Y+  L              ++    GE C +  G F    ++    +     L+        HG    A+    G HH++  +A G+C++N+  LA+   L      RV  +DID+H+G G  E FYT+D+V+TVS H
Sbjct:   28 YDP--GFLDVLEKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIEKL--------------VEADKSGERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDCHGKIAYALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLH 205          

HSP 2 Score: 30.0314 bits (66), Expect = 2.206e-15
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  766 GDYFPXTGDIRDIGYSKGKFYSLNVPLDDGIDD 864
            G   P  G I ++G   G  Y+LNVPL +G  D
Sbjct:  212 GSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGD 244          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDAC6_HUMAN (Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.531e-13
Identity = 60/198 (30.30%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  204 YDPEVGNY--YYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGG--SVGGAVKLNHG-LCDIAINWAGGL----HHAKKCEASGFCYVNDIVLAI--LELLKQHE-RVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            YD  + N+   +   HP  P RI      L   GL      L P PA E +L   H+ +YV  LR+    T++ + R+L R     +   FD ++    T+A    + G A +L    L    +N A  +    HHA++  A GFC+ N + +A    + +  H  R+L VD D+HHG G +  F     V+ VS H+
Sbjct:  485 YDQNMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRA----TEKMKTRELHR-----ESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHR 673          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDA18_ARATH (Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.923e-13
Identity = 55/176 (31.25%), Postives = 84/176 (47.73%), Query Frame = 3
Query:  255 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGL--CDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            P RIR+    L   G+ Q   VL    A ++ L   H   +V+ ++SI+  T++   R+ K  +  +   +  G        AG  V  A K+  G   C  AI    G HHA+  EA GFC  N++ +A   LL +      +++L VD DIHHG G ++ F+   RV+  S H+
Sbjct:   83 PDRIRVIWEKLQLAGVTQRCVVLGGSKAEDKHLKLVHTKKHVNLVKSIS--TKKKDSRRNKIASQLDSIYLNGGSSEAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHR 255          

HSP 2 Score: 25.0238 bits (53), Expect = 8.923e-13
Identity = 11/37 (29.73%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  751 HSIRSGDYFPX--TGDIRDIGYSKGKFYSLNVPLDDG 855
            H    G ++P    GD   +G   G+ +++NVP + G
Sbjct:  254 HRHDHGSFYPFGDDGDFNMVGEGPGEGFNINVPWEQG 290          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: Y1628_SYNP2 (Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1628 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.678e-12
Identity = 57/177 (32.20%), Postives = 83/177 (46.89%), Query Frame = 3
Query:  243 HPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFL--RSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGA-VKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQ--HERVLYVDIDIHHGEGVEETFYTTDRVMTVSFH 758
            H     + R+ H LL   G++Q  QV +P       L   H  DYV+     ++TP+ Q+          +G   P   G+     T  GG++  A + L HGL   A N AGG HHA     SGFC +ND+ +A   + ++   +R+L VD+D+H G+G    F     V T S H
Sbjct:   19 HRFPMPKFRLLHGLLLEDGVIQPEQVYQPQLPDRAWLELVHEPDYVTAYCQGTLTPKAQR---------RIG--LPWSAGVVQRTLTAVGGTILTAQLALEHGL---ACNTAGGTHHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQDDPTVFTFSMH 181          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDA1_YEAST (Histone deacetylase HDA1 OS=Saccharomyces cerevisiae GN=HDA1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.376e-12
Identity = 47/197 (23.86%), Postives = 94/197 (47.72%), Query Frame = 3
Query:  225 YYYGQGHPMKPHRIRMTHALLAHYGLLQNM---------QVLKPFPAR---ERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLC--DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH----ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            + Y   HP  P RI   + +LA  GL+ +           ++   P R     ++   H  +++ F+ S    ++++ L++ ++   G+     +  ++  +   GG++     +  G     +A+    G HHA+   A GFC  +++ +A   +LK +     R++ +D DIHHG G +++FY  D+V+ VS H+
Sbjct:   77 FEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVRAATSEEILEVHTKEHLEFIESTEKMSREELLKETEK---GDSVYFNNDSYASARLPCGGAIEACKAVVEGRVKNSLAVVRPPG-HHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHR 269          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDAC7_HUMAN (Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 2.633e-11
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 3
Query:  579 HHAKKCEASGFCYVNDIVLAILELLKQHE--RVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            HHA    A GFC+ N + +A  +L +Q +  ++L VD D+HHG G ++TFY    V+ +S H+
Sbjct:  669 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHR 731          

HSP 2 Score: 30.0314 bits (66), Expect = 2.633e-11
Identity = 11/37 (29.73%), Postives = 22/37 (59.46%), Query Frame = 1
Query:  751 HSIRSGDYFPXTGDIRDIGYSKGKFYSLNVPLDDGID 861
            H    G++FP +G + ++G   G+ +++NV    G+D
Sbjct:  730 HRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 766          
BLAST of EY720493 vs. ExPASy Swiss-Prot
Match: HDAC7_MOUSE (Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 5.758e-11
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 3
Query:  579 HHAKKCEASGFCYVNDIVLAILELLKQH---ERVLYVDIDIHHGEGVEETFYTTDRVMTVSFHK 761
            HHA    A GFC+ N + +A  +L +QH    ++L VD D+HHG G ++TFY    V+ +S H+
Sbjct:  656 HHADHSTAMGFCFFNSVAIACRQL-QQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHR 718          

HSP 2 Score: 30.0314 bits (66), Expect = 5.758e-11
Identity = 11/37 (29.73%), Postives = 22/37 (59.46%), Query Frame = 1
Query:  751 HSIRSGDYFPXTGDIRDIGYSKGKFYSLNVPLDDGID 861
            H    G++FP +G + ++G   G+ +++NV    G+D
Sbjct:  717 HRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLD 753          
The following BLAST results are available for this feature:
BLAST of EY720493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
ACUC_STAAN3.594e-2029.67Acetoin utilization protein acuC OS=Staphylococcus... [more]
ACUC_STAAM3.594e-2029.67Acetoin utilization protein acuC OS=Staphylococcus... [more]
HDA5_ARATH9.913e-1631.19Histone deacetylase 5 OS=Arabidopsis thaliana GN=H... [more]
HDA8_ARATH2.206e-1527.18Histone deacetylase 8 OS=Arabidopsis thaliana GN=H... [more]
HDAC6_HUMAN7.531e-1330.30Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=... [more]
HDA18_ARATH8.923e-1331.25Histone deacetylase 18 OS=Arabidopsis thaliana GN=... [more]
Y1628_SYNP21.678e-1232.20Uncharacterized protein SYNPCC7002_A1628 OS=Synech... [more]
HDA1_YEAST6.376e-1223.86Histone deacetylase HDA1 OS=Saccharomyces cerevisi... [more]
HDAC7_HUMAN2.633e-1139.68Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=... [more]
HDAC7_MOUSE5.758e-1140.63Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-C07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720493 ID=EY720493; Name=EY720493; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGCTATTCTACACGCTGCATTACGCAAGTTCAGCCCCGTCT
TTTTATTCTCTTGAGGTCTCGTCCCGTTGCATTCTTAGTTAGTGTTGGCT
CTCCCAGTAAGTGCCGGCCCCAAGAAATATTATTCATATGGACACTGGAG
GCAATTCTTTACCATCTGGTACTGATGGCGTTAAGAGAAAGGTGTGTTAT
TTCTACGACCCAGAGGTGGGCAATTACTACTATGGACAGGGTCACCCAAT
GAAACCCCATCGCATTCGTATGACCCATGCCCTTCTCGCCCACTACGGCT
TGCTTCAGAACATGCAGGTCCTCAAACCTTTTCCTGCTAGGGAAAGGGAT
CTTTGCCGCTTCCATGCCGATGATTATGTCTCCTTCCTCAGGAGTATCAC
CCCTGAGACTCAGCAGGATCAGCTTAGGCAGCTCAAGCGCTTTAATGTTG
GTGAAGATTGCCCTGTCTTTGACGGTCTTTTCTCCTTCTGTCAAACTTAT
GCTGGGGGCTCTGTTGGTGGTGCTGTCAAGTTGAATCACGGCCTCTGTGA
TATTGCTATCAACTGGGCCGGTGGCCTTCATCATGCTAAGAAATGTGAAG
CTTCCGGATTCTGTTATGTCAATGACATTGTCTTGGCCATTTTGGAGCTA
CTTAAGCAGCATGAGCGTGTATTATATGTAGATATTGATATCCATCATGG
AGAGGGCGTGGAGGAAACATTTTATACAACTGATAGGGTAATGACTGTTT
CATTCCATAAGGTCCGGAGATTATTTTCCTGNTACAGGGGATATACGTGA
TATTGGTTATTCGAAAGGAAAGTTCTACTCCCTTAATGTTCCTCTTGATG
ATGGTATCGATGATGAAAG
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