EY720479

Overview
NameEY720479
Unique NameEY720479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.057e-20
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K  VTM+  E + D+++ G E+++  I    +   AYHESGHA+  ++ + A P+ K TI+PRG   LG    +P N+    T+ QL     +++GGR AE+++   D
Sbjct:  504 KEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTD 610          

HSP 2 Score: 46.595 bits (109), Expect = 2.057e-20
Identity = 26/89 (29.21%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            I+TGA +D +  TK+    V  +G S+K+G++++    DT ++    S +T + I+ E+R  + ++Y R   +++ H +    +AE LL
Sbjct:  612 ITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALL 693          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.683e-20
Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTL-GGRAAEQVL 345
            K  V+M  FE A D+++ G E+++ V+S  ++ + AYHE+GH + G  +   +P  KVTI+PRG  ALG   ++P  + L    Q  +    TL GGR AE+++
Sbjct:  377 KRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRG-RALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEII 479          

HSP 2 Score: 45.0542 bits (105), Expect = 2.683e-20
Identity = 28/95 (29.47%), Postives = 49/95 (51.58%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED------TFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            +STGA ND++  T +    V  +GFS+K+G L + + E       +   +K  S +T  IID EV+  +   Y R   ++ E+ + +  + E L+
Sbjct:  485 VSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALI 579          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.474e-20
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K  VTM+  E + D+++ G E+++  I    +   AYHESGHA+  ++ + A P+ K TI+PRG   LG    +P N+    T+ QL     +++GGR AE+++   D
Sbjct:  562 KEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRG-PTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTD 668          

HSP 2 Score: 45.8246 bits (107), Expect = 3.474e-20
Identity = 26/89 (29.21%), Postives = 50/89 (56.18%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            I+TGA +D +  TK+    V  +G S+K+G++++    DT ++    S +T + I+ E+R  +  +Y R   +++ H +    +AE LL
Sbjct:  670 ITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALL 751          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.487e-20
Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K  VTM  FE A D++  G E++  +++  ++ + AYHE+GHA+ G+ +   +P+ KVTI+PRG  ALG   ++P  + + ++++QL         GR AE ++  E+
Sbjct:  376 KRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEE 482          

HSP 2 Score: 45.0542 bits (105), Expect = 3.487e-20
Identity = 27/95 (28.42%), Postives = 50/95 (52.63%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED------TFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            ISTGA ND++  T +    V  +GFS+K+G + + + E       +   +K  S +T   ID EVR  V + Y R  +++ ++ + +  + + L+
Sbjct:  484 ISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALV 578          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.522e-20
Identity = 37/108 (34.26%), Postives = 65/108 (60.19%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K  VTM  FE A D++  G E++  +++  ++ + AYHE+GHA+ G+ +   +P+ KVTI+PRG  ALG   ++P  + + ++++QL         GR AE ++  E+
Sbjct:  122 KRTVTMLEFEKAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRG-RALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEE 228          

HSP 2 Score: 45.0542 bits (105), Expect = 3.522e-20
Identity = 27/95 (28.42%), Postives = 50/95 (52.63%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQRED------TFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            ISTGA ND++  T +    V  +GFS+K+G + + + E       +   +K  S +T   ID EVR  V + Y R  +++ ++ + +  + + L+
Sbjct:  230 ISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALV 324          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.897e-20
Identity = 34/108 (31.48%), Postives = 66/108 (61.11%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K +V M   E A D+V+ G+E+++ ++S  +++  AYHE GHA+ G +   ++P+ K TI+PRG  ALG    +P N+   + ++++     + + GR AE+++  ++
Sbjct:  380 KKEVEMHDLEEAKDKVMMGVERRSMIMSDEQKKLTAYHEGGHALVGLYCLASDPIHKATIIPRG-RALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKE 486          

HSP 2 Score: 45.0542 bits (105), Expect = 5.897e-20
Identity = 28/94 (29.79%), Postives = 49/94 (52.13%), Query Frame = 2
Query:  353 KISTGAQNDLEKVTKMTYAQVAVYGFSDKVG-LLSFPQREDTF---EMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            K+++GA +D++  T+M  A V  +G SDKVG +      ED +     S   S  T  +ID EV++ V   Y     ++ +H + +  +A+ L+
Sbjct:  487 KVTSGASSDIKMATRMAKAMVTDWGLSDKVGPVYHGSASEDMYTNRNSSSDRSESTSELIDEEVKKIVTTGYDLAKDILTKHLDQLHILAKALI 580          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.953e-20
Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP-NENLLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            K  VTM+  E + D+++ G E+++  I    +   AYHESGHA+  ++ + A P+ K TI+PRG   LG    +P N+     + QL     +++GGR AE+++   D
Sbjct:  504 KEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRG-PTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTD 610          

HSP 2 Score: 46.595 bits (109), Expect = 9.953e-20
Identity = 26/89 (29.21%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  356 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            I+TGA +D +  TK+    V  +G S+K+G++++    DT ++    S +T + I+ E+R  + ++Y R   +++ H +    +AE LL
Sbjct:  612 ITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTY---SDTGKL----SPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALL 693          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.191e-19
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1
Query:   37 KSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLXE 354
            K ++T+   + +IDR++ G+E   K+I    +  VAYHE GHA+     E  +P+ KVT+VPRG A  G   ++P E+  L++K+QLF      LGGRAAE V+  E
Sbjct:  449 KDKITLTEIDDSIDRIVAGMEG-TKMIDGKSKAIVAYHEVGHAICATLTEGHDPVQKVTLVPRGQAR-GLTWFLPGEDPTLVSKQQLFARIVGGLGGRAAEDVIFGE 553          

HSP 2 Score: 35.8094 bits (81), Expect = 2.191e-19
Identity = 28/99 (28.28%), Postives = 52/99 (52.53%), Query Frame = 2
Query:  353 KISTGAQNDLEKVTKMTYAQVAVYGFSDKVG--LLSFP---QREDTFEM--SKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL*K 628
            +I+TGA  DL++VT++    V ++G S+ +G   L+ P   Q +    M      S K    ID  V++ +G AY    + +  ++E + ++ ++LL K
Sbjct:  555 EITTGAAGDLQQVTEIARQMVTMFGMSE-IGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEK 652          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.856e-19
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   43 QVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYV-PNENLLLTKEQLFDMTCMTLGGRAAEQVL 345
            Q+T +  + AIDRVI G+E    +  K+ +R +AYHE+GHA+    L +  P+ KVT++PR   A G   ++  NE  LL+K QL  M  + LGGRAAE+ +
Sbjct:  381 QITWKEIDDAIDRVIAGMEGTPIMDGKI-KRLIAYHETGHALTATLLPNHPPVQKVTLIPR-RQAKGLTWFMQDNERDLLSKSQLMSMIMVALGGRAAEEAV 480          

HSP 2 Score: 40.0466 bits (92), Expect = 2.856e-19
Identity = 27/101 (26.73%), Postives = 49/101 (48.51%), Query Frame = 2
Query:  341 FCXGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTF-----EMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL*K 628
            F   +++TGA NDL++VT +    V  +G S    L      E+ F      +    S +  A ID +VR  +   Y + ++L++ ++  + +I E L+ K
Sbjct:  481 FGNAEVTTGASNDLQQVTNLARQMVTRFGMSSLGPLCLETGNEEIFLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEK 581          
BLAST of EY720479 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.458e-17
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 1
Query:   64 EAAIDRVIGGLEKKNKVISKLERRT---------------VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLLTKEQLFDMTCMTLGGRAAEQVLLXED 357
            E A DR+I G E+K+  IS   ++                 AYHESGHA+     + A P+ K TI+PRG +ALG    +P+++   ++K+QL     + +GGR AE+++  ED
Sbjct:  558 EFAKDRIIMGTERKSMFISDESKKACLFKLLYFILRELILTAYHESGHAIVALNTQGAHPIHKATILPRG-SALGMVTQLPSQDETSISKKQLLARLDVCMGGRVAEELIFGED 670          

HSP 2 Score: 44.2838 bits (103), Expect = 1.458e-17
Identity = 27/94 (28.72%), Postives = 48/94 (51.06%), Query Frame = 2
Query:  341 FCXGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPQREDTFEMSKPYSSKTGAIIDGEVREWVGKAYVRTVQLIEEHKEHVAQIAELLL 622
            F    ++TGA+NDL   T++    V+  G SD +G +   +R      S+         ID EV + + +AY R  +L+++H++ +  +A  LL
Sbjct:  667 FGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGPVHVKERPSVEMQSR---------IDAEVVKLLREAYGRVKRLLKKHEKQLHALANALL 751          
The following BLAST results are available for this feature:
BLAST of EY720479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
YMEL1_MOUSE2.057e-2035.19ATP-dependent metalloprotease YME1L1 OS=Mus muscul... [more]
FTSH_BUCAI2.683e-2037.50Cell division protease ftsH OS=Buchnera aphidicola... [more]
YMEL1_HUMAN3.474e-2035.19ATP-dependent metalloprotease YME1L1 OS=Homo sapie... [more]
FTSH1_HAEIN3.487e-2034.26Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH2_HAEIN3.522e-2034.26Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH_RICBR5.897e-2031.48Cell division protease ftsH homolog OS=Rickettsia ... [more]
YMEL1_RAT9.953e-2034.26ATP-dependent metalloprotease YME1L1 OS=Rattus nor... [more]
FTSH6_ARATH2.191e-1941.12Cell division protease ftsH homolog 6, chloroplast... [more]
FTSH_CYAME2.856e-1942.16Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH9_ORYSJ1.458e-1735.09Cell division protease ftsH homolog 9, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720479 ID=EY720479; Name=EY720479; organism=Citrus sinensis; type=EST; length=908bp
CACGCGTCCGGCTGCTTTGATTGCTGCAAGGGGTGAAAATCACAAGTCAC
AATGGAACATTTTGAGGCAGCTATAGATAGGGTCATTGGTGGTCTGGAGA
AGAAGAATAAGGTTATAAGCAAGTTGGAGCGCCGGACAGTTGCTTACCAT
GAATCAGGCCATGCTGTTGCTGGATGGTTTCTGGAACATGCAGAACCCTT
GTTAAAAGTGACAATTGTTCCTCGAGGTACAGCTGCACTTGGATTTGCCC
AGTATGTCCCTAACGAGAACCTTCTTCTGACAAAGGAGCAGCTTTTTGAT
ATGACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGCAGGTTTTGTTGNG
GGAAGATATCTACTGGAGCTCAAAATGACTTGGAGAAGGTAACAAAGATG
ACCTATGCCCAAGTTGCCGTGTATGGTTTTAGCGATAAGGTTGGTCTCTT
GTCTTTCCCACAAAGAGAAGACACATTCGAAATGAGTAAGCCGTACAGTA
GCAAGACTGGGGCAATCATAGATGGCGAGGTTCGAGAATGGGTAGGCAAG
GCATATGTACGCACAGTCCAACTTATTGAGGAACACAAAGAGCATGTAGC
TCAAATTGCCGAGTTATTGCTTTGAAAAGGAAGTTCTTCACCAAGATGAT
CTGCTTCGAATTCTGGGGTGAACGGGCCATTCCAATCCAGGTGACGTCCA
AAAGTCATGAGAGATTTCGACCGAGGTTTCGGAAGAAGGAAGAGAACCAG
CTCGACCGCCCCGCAGAGATGGAACCGTGGATTAATGGTGGCTCACGTCT
CGAGCCTCTGGGTGCTCCCCGGATGAAAAATATGTGAGGTCAAAGTGTGG
GATCCAACCGTCAAAAAGATTGGCCGTTGGAGCTTGTTGGTCCCCCCGCC
GTGGAATA
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