EY720463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MEXB_PSEAE (Multidrug resistance protein mexB OS=Pseudomonas aeruginosa GN=mexB PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 2.964e-19 Identity = 49/138 (35.51%), Postives = 84/138 (60.87%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448 KL+++N + G PAPG+S G A+A ++ +QLP + W S + G+ + +L+V+++ LAA YES + P +++ VPL + GAL+ ++ + +++ Q+GL+T IGL +K+ IL+VEFA EL Sbjct: 814 KLERYNGVPAMEILGEPAPGLSSGDAMAAVEEIVKQLPKGVGYSWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPFSVMLVVPLGVIGALLATSMRGLSNDVFFQVGLLTTIGLSAKNAILIVEFAKEL 951
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: SRPB_PSEPU (Solvent-resistant pump membrane transporter srpB OS=Pseudomonas putida GN=srpB PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 50/138 (36.23%), Postives = 81/138 (58.70%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448 KL+++ +S G PAPG S G A+ + QQLPA + S + I G+ L + ++++++ LAA YES + P+ +++ VPL I GA++ T ++Y Q+GL+T +GL +K+ IL+VEFA EL Sbjct: 813 KLERYGGISSLNILGEPAPGYSTGDAMIAIAEIMQQLPAGIGLSYTGLSYEEIQTGDQAPLLYALTVLIVFLCLAALYESWSVPVSVIMVVPLGILGAVLATLWRDLTADVYFQVGLMTTVGLSAKNAILIVEFAKEL 950
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTF_ECOL6 (Multidrug resistance protein mdtF OS=Escherichia coli O6 GN=mdtF PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAII 487 +L+++N S G A G S G A+ F+ +LPA + W S Q N + +L+V+++ LAA YES + P +++ VPL + GAL+ L + ++Y Q+GL+T IGL +K+ IL+VEFA E+ TP +AII Sbjct: 813 RLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPVEAII 963
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTF_ECOLI (Multidrug resistance protein mdtF OS=Escherichia coli (strain K12) GN=mdtF PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19 Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAII 487 +L+++N S G A G S G A+ F+ +LPA + W S Q N + +L+V+++ LAA YES + P +++ VPL + GAL+ L + ++Y Q+GL+T IGL +K+ IL+VEFA E+ TP +AII Sbjct: 813 RLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAII 963
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTF_ECO57 (Multidrug resistance protein mdtF OS=Escherichia coli O157:H7 GN=mdtF PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19 Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAII 487 +L+++N S G A G S G A+ F+ +LPA + W S Q N + +L+V+++ LAA YES + P +++ VPL + GAL+ L + ++Y Q+GL+T IGL +K+ IL+VEFA E+ TP +AII Sbjct: 813 RLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAII 963
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: TTGH_PSEPU (Toluene efflux pump membrane transporter ttgH OS=Pseudomonas putida GN=ttgH PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.604e-19 Identity = 49/138 (35.51%), Postives = 81/138 (58.70%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448 +L+++ +S G PAPG S G ++ + QQLPA + S + IH G+ L + ++++ + LAA YES + P+ +++ VPL I GA++ T ++Y Q+GL+T +GL +K+ IL+VEFA EL Sbjct: 813 RLERYGGISSLNILGEPAPGYSTGDSMIAIAEIMQQLPAGIGLSYTGLSYEEIHAGDQAPLLYALTVLIVVLCLAALYESWSVPVSVIMVVPLGILGAVLATLWRDLTADVYFQVGLMTTVGLSAKNAILIVEFAKEL 950
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: TTGE_PSEPU (Toluene efflux pump membrane transporter ttgE OS=Pseudomonas putida GN=ttgE PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 45/138 (32.61%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448 KL+++ ++ G PAPG S G A+ + QQLP+ + S + I G+ + + ++++++ LAA YES + P+ +++ VPL I GA++ ++Y Q+GL+T +GL +K+ IL++EFA EL Sbjct: 815 KLERYGGISAVNILGEPAPGFSTGDAMIAIAQIMQQLPSGIGLSYNGLSYEEIRTGDQAPMLYALTVLIVFLCLAALYESWSVPMSVILVVPLGIFGAVLATLWRGLEADVYFQVGLMTTVGLSAKNAILIIEFAKEL 952
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: SEPB_PSEP1 (Probable efflux pump membrane transporter sepB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=sepB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 45/138 (32.61%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448 KL+++ ++ G PAPG S G A+ + QQLP+ + S + I G+ + + ++++++ LAA YES + P+ +++ VPL I GA++ ++Y Q+GL+T +GL +K+ IL++EFA EL Sbjct: 813 KLERYGGISAVNILGEPAPGFSTGDAMIAIAQIMQQLPSGIGLSYNGLSYEEIRTGDQAPMLYALTVLIVFLCLAALYESWSVPMSVILVVPLGIFGAVLATLWRGLEADVYFQVGLMTTVGLSAKNAILIIEFAKEL 950
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTB_YERPS (Multidrug resistance protein mdtB OS=Yersinia pseudotuberculosis GN=mdtB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 2 VVSLHSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQ--QLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 + ++ P + NQ SAT A G SLG+AVA + + QLPA + +Q + F + + + A++ +Y+VL YES P+ IL T+P + GAL+ L L +++ IG++ LIG++ K+ I+M++FA + TP AI Sbjct: 795 IATIEERFGPLSINHLNQFPSATVSFNLAQGYSLGEAVAAVTLAEKEIQLPADITTRFQGSTLAFQAALGSTLWLIIAAIVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMLTGNELDVIAIIGIILLIGIVKKNAIMMIDFALAAERDQGMTPYDAI 957
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTB_YERPE (Multidrug resistance protein mdtB OS=Yersinia pestis GN=mdtB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 2 VVSLHSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQ--QLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 + ++ P + NQ SAT A G SLG+AVA + + QLPA + +Q + F + + + A++ +Y+VL YES P+ IL T+P + GAL+ L L +++ IG++ LIG++ K+ I+M++FA + TP AI Sbjct: 795 IATIEERFGPLSINHLNQFPSATVSFNLAQGYSLGEAVAAVTLAEKEIQLPADITTRFQGSTLAFQAALGSTLWLIIAAIVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMLTGNELDVIAIIGIILLIGIVKKNAIMMIDFALAAERDQGMTPYDAI 957 The following BLAST results are available for this feature:
BLAST of EY720463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720463 ID=EY720463; Name=EY720463; organism=Citrus sinensis; type=EST; length=489bpback to top |