EY720463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALG2 (Multidrug resistance protein mdtC OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mdtC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.871e-14 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TPAQAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPAQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALEP (Multidrug resistance protein mdtC OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.871e-14 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TPAQAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPAQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: NOLG_RHIME (Nodulation protein nolG OS=Rhizobium meliloti GN=nolG PE=4 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 3.750e-14 Identity = 39/119 (32.77%), Postives = 72/119 (60.50%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAH--SQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFAN 442 G +LG VA L+A +P F + D+ + + A+I IY++LA+Q+ S P+ I++T+PLS+ G L+ L +T+N+++ IG++ L+GL++K+ IL+V+++N Sbjct: 822 GRTLGDVVADLKAAMTKMDIPVGFRISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSFIQPIAIIMTMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSN 940
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALPC (Multidrug resistance protein mdtC OS=Salmonella paratyphi C (strain RKS4594) GN=mdtC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TPAQAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPAQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALCH (Multidrug resistance protein mdtC OS=Salmonella choleraesuis GN=mdtC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.897e-14 Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TPAQAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPAQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALPA (Multidrug resistance protein mdtC OS=Salmonella paratyphi A GN=mdtC PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.354e-14 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLEILYESYVHPLTILSTLPSASVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALTY (Multidrug resistance protein mdtC OS=Salmonella typhimurium GN=mdtC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALTI (Multidrug resistance protein mdtC OS=Salmonella typhi GN=mdtC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAIDRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALNS (Multidrug resistance protein mdtC OS=Salmonella newport (strain SL254) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALDC (Multidrug resistance protein mdtC OS=Salmonella dublin (strain CT_02021853) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.091e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943 The following BLAST results are available for this feature:
BLAST of EY720463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720463 ID=EY720463; Name=EY720463; organism=Citrus sinensis; type=EST; length=489bpback to top |