EY720463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALPK (Multidrug resistance protein mdtC OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P++ + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLEILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_CITK8 (Multidrug resistance protein mdtC OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.425e-13 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL +A + QL P++ + ++ F N+ ++ L A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSEATEAINRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILILAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALSV (Multidrug resistance protein mdtC OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALPB (Multidrug resistance protein mdtC OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALHS (Multidrug resistance protein mdtC OS=Salmonella heidelberg (strain SL476) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALAR (Multidrug resistance protein mdtC OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFAGTAQVFQQTMNSQLILIMAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTC_SALA4 (Multidrug resistance protein mdtC OS=Salmonella agona (strain SL483) GN=mdtC PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.861e-13 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 92 GVSLGQAVAFLQAHSQQL--PASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 G SL QA + QL P + + ++ F N+ ++ + A+ +Y+VL YES PL IL T+P + GAL+ L L A ++ IG++ LIG++ K+ I+MV+FA E Q TP QAI Sbjct: 811 GTSLSQATEAINRTMTQLGVPPTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAI 943
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTB_ENTS8 (Multidrug resistance protein mdtB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdtB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.431e-13 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 29 PNKLKQFNQQNSATFQGIPAPGVSLGQAV-AFLQAHSQ-QLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484 P + +Q S T G SLG AV A QA + PA + +Q + F + + L +++ +Y+VL YES P+ IL T+P + GAL+ L + A +++ IG++ LIG++ K+ I+M++FA + TP +AI Sbjct: 804 PLTINHLDQFPSTTISFNVPDGYSLGDAVDAITQAEADLAFPAEITTQFQGSTLAFQAALGSTLWLILASVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALLIAGAELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMTPREAI 957
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: YCBL_BACUN (Uncharacterized 17.3 kDa protein in cblS 5'region OS=Bacteroides uniformis PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 34/84 (40.48%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 200 GNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQ 451 G + F+ AL+V ++VLAAQYES T P+ ++ +P+++ GA++ + ++IYTQIG++ L+ L +K+GIL+VEFA + + Sbjct: 12 GTTTTVVFVMALLVAFLVLAAQYESWTSPVAAVMGLPVALLGAMLGCYVMGTPVSIYTQIGIILLVALSAKNGILIVEFARDFR 95
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MDTB_ERWCT (Multidrug resistance protein mdtB OS=Erwinia carotovora subsp. atroseptica GN=mdtB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 29 PNKLKQFNQQNSATFQGIPAPGVSLGQAV-AFLQAHSQQ-LPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFA 439 P + +Q S T A G +LG+AV A QA Q LPA + +Q + F ++ + + A++ +Y+VL YES P+ IL T+P + GAL+ L + +++ IG++ LIG++ K+ I+M++FA Sbjct: 804 PLAINHIDQFPSTTISFNVASGYALGEAVDAITQAEQQMNLPADITTRFQGSTLAFQSALSSTVWLIVAAIVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMMAGKDLDVIAIIGIILLIGIVKKNAIMMIDFA 942 The following BLAST results are available for this feature:
BLAST of EY720463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 95
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720463 ID=EY720463; Name=EY720463; organism=Citrus sinensis; type=EST; length=489bpback to top |