EY720433

Overview
NameEY720433
Unique NameEY720433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720433 vs. ExPASy Swiss-Prot
Match: BUD31_CAEEL (Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 6.539e-15
Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:   19 AENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEIPR 141
            AE +PH+GKRK E  WPIF+I HQRS+Y++++YYK+ EI R
Sbjct:   35 AETEPHEGKRKTEINWPIFRIHHQRSRYVYDMYYKKAEISR 75

HSP 2 Score: 38.5058 bits (88), Expect = 6.539e-15
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 3 
Query:  135 SKELYEFCLDQGYGDSNLIAKWKK 206
            S+ELYEFCL   + D+ LIAKWKK
Sbjct:   74 SRELYEFCLTAKFADAALIAKWKK 97
The following BLAST results are available for this feature:
BLAST of EY720433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BUD31_CAEEL6.539e-1560.98Protein BUD31 homolog OS=Caenorhabditis elegans GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-D10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720433 ID=EY720433; Name=EY720433; organism=Citrus sinensis; type=EST; length=885bp
CACGCGTCCGGCTTGTCAGCTGAAAATGATCCACATGATGGCAAGAGAAA
GTGTGAAACACTGTGGCCCATCTTCAAAATTGCGCATCAGAGGAGCCAGT
ACATATTTGAGCTTTATTACAAAAGGAATGAGATTCCAAGGAATTGTACG
AGTTCTGCTTGGATCAAGGATATGGTGACAGCAACTTAATCGCTAAGTGG
AAAAAGGTTCATACTTGCAGTTCTTTTATGAATAAATTATGCAAAGGAGT
GTCTTACTTATTCACCGTTTAGTGATTTTCTTTCTTCTTTGGTTCAGAAT
TTCAAGCTTATCCATGATTGGGACAATGTTGAAATCCAAAATTAAACAGT
CCTGATATCTGACTTGTTCATCTGCGTAACTCACTCTGCTAGTGCACTTT
TTAGCTTTTCTGGGACATGGGTTTTAACAAATATATTATTCAGTTCTTAA
CATATATATAGCTTTAGACCTCAATGATTTGTGAATATACTAATTAGATG
ACATCTAGTTGAATTACCTTTAGTGAAGCCTCTTTAATCTATTTCAATAG
AAATATATTTCTCCCTGATATACTTCATTTGAAATGCAGCCCGGATATGA
ACGACTCTGCTGGCTACCATGCATACAGCCAAGGGATCCCAGCGTTGGCA
CACATGTGTGTGGAGAATTCCTATCCCCGGAGGGGAAAGAACCTGTGGAG
TGTGTGCCTGGTGGGCTGTAGGGCCTGGCCCCTGGGGAATAATTGAATCA
CGTGGTCGACCCGTTCTTCCGGTGCGAGTTACCTTACTCCTAGAGGACGG
ATATGTCGAGGAGGGGGAACATGCGGGCTTCCCGACTGGCAAATTCGGGG
GTTGGGTGTGGGGAGGGGGGATGGTCGGGGGGGGA
back to top