EY720377

Overview
NameEY720377
Unique NameEY720377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720377 vs. ExPASy Swiss-Prot
Match: AGO17_ORYSJ (Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 45/147 (30.61%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  118 RPYRSKTFKVEISFAAKIPIQAIANALRGQESENSQEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFL--IANQNV---RDPFSIDWAKAKRTLKNLRIK 543
            R  R + F V + FAAKI +  +     G+ +  S+ A R LD++L++    +       SF+  +      +   +   RGFH   + TQ GL LNIDVS+++ I+P PVVD++  + N+++   R   S ++ K K  L+ L+++
Sbjct:  138 RHLRVRDFVVTLKFAAKISLWTLRKFRGGKPNRESRAALRALDVVLKELPTARYTQFAG-SFYSPNLGECRQLCKVLESWRGFHQRIQATQMGLQLNIDVSSSVFIKPVPVVDYVAQLLNEDILLDRPLCSTEFLKIKEALEGLKVQ 283          
BLAST of EY720377 vs. ExPASy Swiss-Prot
Match: AGO13_ORYSJ (Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.711e-11
Identity = 73/257 (28.40%), Postives = 110/257 (42.80%), Query Frame = 1
Query:   88 PNGNDRKRLRRPYRSKTFKVEISFAAKIPIQAIANALRGQESENSQEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRD---PFS-IDWAKAKRTLKNLRIKTITSXSE---YKITGLSEKTV*EQMFSLKQKNVXDDDGEVQELEIPVYDYFVNNRNINLR*FWRSNMHPCWVNKS-GRPIFL-LTFGDWGSLQRYRKPLTN 831
            P   D++R  R Y     K+ I  A +     +   L G++ +  QE  +                     F H       D+G G+   RG++ S R TQ GLSLNID+S T   +P  V+ F+    N+RD   P S  D  K K+ L+ +RI+T     +   YKITG++   + + +F +      DD+G  +     V  YF +  N  L    +    PC  + S  RP++L +        QRY K L N
Sbjct:   95 PEKKDKERAEREY-----KITIRIAGRTDFYHLQQFLLGRQRDMPQETIQ---------------------FGHR-----GDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLIFPV------DDNGTRK----TVVQYFWDRYNYRL----KYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNN 306          
The following BLAST results are available for this feature:
BLAST of EY720377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
AGO17_ORYSJ6.711e-1130.61Protein argonaute 17 OS=Oryza sativa subsp. japoni... [more]
AGO13_ORYSJ6.711e-1128.40Protein argonaute 13 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-F04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720377 ID=EY720377; Name=EY720377; organism=Citrus sinensis; type=EST; length=839bp
CGTAACAAGCTTGAGTTCACTGTTGTGCTTGAGGATATTTCGTCTAACAG
GAACAACGGAAATGCTAGTCCTGATGCGCATGGAAGTCCAAACGGGAATG
ACAGAAAAAGATTACGGCGTCCATATCGATCCAAAACATTTAAAGTGGAA
ATTAGCTTTGCTGCAAAAATTCCAATACAGGCCATTGCAAATGCCCTACG
TGGTCAGGAATCAGAGAACTCACAGGAGGCCTTTAGGGTACTGGATATTA
TATTACGGCAGCATGCTGCAAAACAGGGCTGTCTCCTAGTTCGCCAATCG
TTCTTTCACAATGATCCAAAAAATTTTGCTGATGTCGGAGGGGGAGTTCT
TGGCTGCAGAGGATTCCATTCAAGTTTTAGGACCACTCAGGGAGGCTTGT
CTTTGAATATTGATGTATCAACTACCATGATAATTCAGCCGGGTCCAGTA
GTTGATTTTCTTATTGCCAACCAAAATGTTAGAGATCCCTTTTCAATTGA
CTGGGCCAAGGCTAAACGGACACTAAAAAATCTGAGGATTAAGACGATTA
CCTCCNAATCAGAGTACAAGATAACTGGACTGAGTGAGAAAACTGTGTAA
GAGCAAATGTTTTCACTGAAGCAGAAGAATGTNANGGATGATGATGGTGA
AGTGCAGGAACTGGAAATACCTGTTTATGACTATTTTGTTAATAATCGCA
ATATAAATTTGCGATAATTCTGGAGATCTAACATGCATCCATGTTGGGTA
AACAAAAGCGGCCGACCTATATTCCTCTTGACCTTTGGGGATTGGGGGTC
TTTACAACGTTACCGAAAACCCCTGACCAATCCACGAAA
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