EY720356

Overview
NameEY720356
Unique NameEY720356
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MSP1_SCHPO (Protein msp1, mitochondrial OS=Schizosaccharomyces pombe GN=msp1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.207e-20
Identity = 56/165 (33.94%), Postives = 95/165 (57.58%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGTNALDVLXGRSYRLQHPWV 510
            L L  + D +  Y EF  +   + TDFS ++  + D  +     ++ +   PI L+IY+ ++ NL+LIDLPG  ++  E QP  +   I  +   Y+ +PN +ILA+  A+ D+A S A++ +R VDP G RT GV+TK+DL+   + A+ +L   +Y L + ++
Sbjct:  303 LTLVHSADTAIPYGEFSGVQLGKITDFSKIQHILTD-LNMAVPSSQGVDDNPIRLTIYASHIPNLSLIDLPGYIQIHSEDQPADLDMKISKLCEKYIREPN-IILAVCAADVDLANSAALRASRRVDPLGLRTIGVVTKMDLVPP-SKAISILHNNNYPLHYGYI 464          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MXC_DANRE (Interferon-induced GTP-binding protein MxC OS=Danio rerio GN=mxc PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.694e-20
Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 1
Query:  136 VTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQG 453
            + G  + IS   I L I S +V +LTLIDLPG+ +VA   QP+ I + I+ ++  ++++  ++ L + PAN DIAT++A+K+A  VDPTG+RT  +LTK DL+ +G
Sbjct:  123 LAGTGEGISHEMITLEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKDLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLCILTKPDLVDRG 228          

HSP 2 Score: 26.5646 bits (57), Expect = 5.694e-20
Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 2
Query:  506 GFGIVN-RSQADINRNIDMIVARRKEREYF 592
            G+ IV  R Q DIN  ++++ A  KER +F
Sbjct:  247 GYMIVKCRGQQDINDKLNLVEALEKERRFF 276          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MX2_BUBBU (Interferon-induced GTP-binding protein Mx2 OS=Bubalus bubalis GN=MX2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.372e-20
Identity = 57/139 (41.01%), Postives = 89/139 (64.03%), Query Frame = 1
Query:   97 SMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIAT---SDAMKLAREVDPTGERTFGVLTKLDLMXQGT--NALDVLXGRSYRLQ 498
            S V  EI+   + + G  + IS   I+L + SP+V +LTLIDLPG+T+VAVE QP  I   I++++   +++  ++ L + P N DIAT   ++A+ +A+EVDP G+RT G+LTK DL+ +GT    L V+   +Y L+
Sbjct:  180 SEVEWEIRRAQNIIAGNGRGISHELINLEVTSPDVPDLTLIDLPGITRVAVENQPQDIGLQIKALI---IQRQETINLVVVPCNVDIATKKYTEALSMAQEVDPDGDRTIGILTKPDLVDKGTEKGVLKVMQNLTYHLK 315          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae GN=MGM1 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 3.015e-18
Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = 1
Query:   16 LQLHKTEDGSQEYAEFLHLPKRRFTDFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDLMXQGTNALDVLXGRSYRLQHPWVWNCEPLPS*YKQKH 552
            L L  T + +   A+F  +      DF  V++ +  E +     ++ +S  PI L+I S  V +L+L+DLPG  +V    QP  +   I  +   Y+  PN +ILAIS A+ D+A S A+K ++  DP G RT GV+TKLDL+     A  +L  + Y L   +V      PS   +KH
Sbjct:  250 LTLVNTPNSNNVTADFPSMRLYNIKDFKEVKRMLM-ELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYIQVEAADQPIELKTKIRDLCEKYLTAPN-IILAISAADVDLANSSALKASKAADPKGLRTIGVITKLDLV-DPEKARSILNNKKYPLSMGYVGVITKTPSSINRKH 425          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_DANRE (Dynamin-like 120 kDa protein, mitochondrial OS=Danio rerio GN=opa1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.506e-13
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   + + +SP  I LS+  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D   S    L  ++DP G+RT  VLTK+DL
Sbjct:  361 DLAALRHEIELRMRKSVKEGQTVSPETISLSVKGPGIQRMVLVDLPGVISTVTTGMAADTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPQGKRTIFVLTKVDL 477          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_RAT (Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus GN=Opa1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   +   +SP  I L++  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D   S    L  ++DP G RT  VLTK+DL
Sbjct:  355 DLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDL 471          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_PONAB (Dynamin-like 120 kDa protein, mitochondrial OS=Pongo abelii GN=OPA1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   +   +SP  I L++  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D   S    L  ++DP G RT  VLTK+DL
Sbjct:  355 DLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDL 471          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_MOUSE (Dynamin-like 120 kDa protein, mitochondrial OS=Mus musculus GN=Opa1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   +   +SP  I L++  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D   S    L  ++DP G RT  VLTK+DL
Sbjct:  355 DLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDL 471          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_HUMAN (Dynamin-like 120 kDa protein, mitochondrial OS=Homo sapiens GN=OPA1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 9.394e-12
Identity = 38/117 (32.48%), Postives = 61/117 (52.14%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   +   +SP  I L++  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D   S    L  ++DP G RT  VLTK+DL
Sbjct:  355 DLAALRHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHGRRTIFVLTKVDL 471          
BLAST of EY720356 vs. ExPASy Swiss-Prot
Match: OPA1_ONCMA (Dynamin-like 120 kDa protein, mitochondrial OS=Oncorhynchus masou GN=opa1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.602e-11
Identity = 39/117 (33.33%), Postives = 63/117 (53.85%), Query Frame = 1
Query:   91 DFSMVRKEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDTIVEDIESMVRSYVEKPNSVILAISPANQDIATSDAMKLAREVDPTGERTFGVLTKLDL 441
            D + +R EI+    +   + + +SP  I LS+  P +  + L+DLPG+      G      E I S+ ++Y++ PN++IL I   + D A +D  +  +   P GERT  VLTK+DL
Sbjct:  367 DLAALRHEIELRMRKSVKEGQTVSPETISLSVKGPGIQRMVLVDLPGVISTVTAGMAADTKETIFSISKNYMQNPNAIILCIQDGSVD-AEADRHRPGQSNGPAGERTIFVLTKVDL 482          
The following BLAST results are available for this feature:
BLAST of EY720356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
MSP1_SCHPO4.207e-2033.94Protein msp1, mitochondrial OS=Schizosaccharomyces... [more]
MXC_DANRE5.694e-2043.40Interferon-induced GTP-binding protein MxC OS=Dani... [more]
MX2_BUBBU9.372e-2041.01Interferon-induced GTP-binding protein Mx2 OS=Buba... [more]
MGM1_YEAST3.015e-1834.08Dynamin-like GTPase MGM1, mitochondrial OS=Sacchar... [more]
OPA1_DANRE6.506e-1333.33Dynamin-like 120 kDa protein, mitochondrial OS=Dan... [more]
OPA1_RAT9.394e-1232.48Dynamin-like 120 kDa protein, mitochondrial OS=Rat... [more]
OPA1_PONAB9.394e-1232.48Dynamin-like 120 kDa protein, mitochondrial OS=Pon... [more]
OPA1_MOUSE9.394e-1232.48Dynamin-like 120 kDa protein, mitochondrial OS=Mus... [more]
OPA1_HUMAN9.394e-1232.48Dynamin-like 120 kDa protein, mitochondrial OS=Hom... [more]
OPA1_ONCMA1.602e-1133.33Dynamin-like 120 kDa protein, mitochondrial OS=Onc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-008-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720356 ID=EY720356; Name=EY720356; organism=Citrus sinensis; type=EST; length=940bp
CCACGCGTCCGGGTACTGCAGCTTCACAAGACAGAAGATGGTTCACAGGA
GTATGCTGAGTTTCTTCACTTGCCTAAAAGACGATTCACTGATTTCTCCA
TGGTTCGTAAGGAAATTCAGGATGAGACTGATAGGGTAACTGGGAAGACG
AAACAAATTTCTCCGATACCTATCCATCTTAGCATCTACTCTCCAAATGT
TGTCAACTTAACCCTGATCGATTTACCTGGTCTGACCAAAGTCGCTGTTG
AGGGACAACCCGATACTATTGTCGAAGACATTGAATCCATGGTGCGATCT
TATGTTGAGAAGCCTAATTCCGTCATATTAGCAATATCTCCAGCCAATCA
AGATATTGCAACTTCTGATGCAATGAAGCTCGCAAGAGAAGTGGATCCCA
CTGGTGAACGGACATTTGGGGTGTTGACGAAGCTGGATTTGATGGANCAA
GGAACCAATGCATTGGATGTGCTANAAGGAAGATCTTATCGACTACAACA
TCCTTGGGTTTGGAATTGTGAACCGCTCCCAAGCTGATATAAACAGAAAC
ATTGACATGATCGTTGCAAGGCGCAAGGAGCGTGAGTACTTTGCTACCAG
TTCCGGACTATGGACACCTAGCCGGCAAAATGGGGTCAGAGTATCTTGGC
AACCTTCTGGTCAAACCACTTGGAAATCCGTTATTAGGGCTCCGAATACC
AACCATCCCTTCCTTTAATAAACAAAAGCATTGAAGAAACTTGAATCTGA
AGAGGAACCATCTTGGGTCGGCCTTATTGCTGTTAATTCTCGGGGTCCCA
CGTATGCGCCATTGGGGAAGTATGCCCGAGCTTTGTACCGGGATTTTCAG
GAACCATTTGGTTAGGGGGGGGACCGTCCAGGTAGCTCGTGTGTGTGGAG
TTTGCGACGCCCCGAGGTTCGCGGGGTTGCGCGGGAGCGT
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