EY720318

Overview
NameEY720318
Unique NameEY720318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720318 vs. ExPASy Swiss-Prot
Match: DPNP_SCHPO (3'(2'),5'-bisphosphate nucleotidase OS=Schizosaccharomyces pombe GN=tol1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.349e-17
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  171 SKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGAYNT--STLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGVL 497
            +K+DKSPVT+ D+G+QA+V   L+  FP++P  +V EEDS  LR++   +T  R+ +LV ET+     Y       S E+++  ID G   GG +GR W LDPIDGTKG L
Sbjct:   39 TKDDKSPVTIGDFGAQAIVISMLKDAFPNDP--IVGEEDSDFLREN--TQTCSRVWELVQETIQHATEYKELGQIKSAEEMMSIIDQGSYHGGRNGRMWTLDPIDGTKGFL 145          
BLAST of EY720318 vs. ExPASy Swiss-Prot
Match: DPNPM_ARATH (Putative PAP-specific phosphatase, mitochondrial OS=Arabidopsis thaliana GN=At4g05090 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 3
Query:  129 CLKVQKALLQSD--VQSKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGAYNTSTLSTEDVIRAIDGGKSEG----GSHGRHWVLDPIDGTKGVL 497
            C+ V+++L  S   +  KND++PVT+AD+G QALVS  L K FPS P  LVAEEDS  +R +        ++ +V+E + S  +   + LS  DV+ AID G  +          +WVLDPIDGT+G L
Sbjct:   64 CVDVKRSLFSSKEKIVEKNDQTPVTIADFGVQALVSLELSKLFPSIP--LVAEEDSHFVRANNL------VSSVVSE-VKSKASIGDNHLSDADVLEAIDRGGKDAYTFCNKPATYWVLDPIDGTRGFL 183          
BLAST of EY720318 vs. ExPASy Swiss-Prot
Match: HAL2_YEAST (3'(2'),5'-bisphosphate nucleotidase OS=Saccharomyces cerevisiae GN=HAL2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 3
Query:  171 SKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGAYNTS--------------TLSTEDVIRAIDGGKSEGGSHGRHWVLDPIDGTKGVL 497
            +KND SPVT  DY +Q ++  A++  FP +   +V EE S  L           ++ ++NE  A+D  YN +                S EDV + ID G  EGG  GR W LDPIDGTKG L
Sbjct:   38 TKNDNSPVTTGDYAAQTIIINAIKSNFPDD--KVVGEESSSGLSD-------AFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFGNYEGGRKGRFWCLDPIDGTKGFL 151          
BLAST of EY720318 vs. ExPASy Swiss-Prot
Match: DPNP_DICDI (3'(2'),5'-bisphosphate nucleotidase OS=Dictyostelium discoideum GN=DDB_G0268652 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.966e-12
Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 3
Query:  129 CLKVQKALLQSDVQSKNDKSPVTVADYGSQALVSFALQKEFPSEPFSLVAEEDSKDLRQDGAQETLERITKLVNETLASDGAYNTSTLSTEDVIRAIDGG--KSEGGSHGRHWVLDPIDGTKGVL 497
            CL +QK L+  D  +K D+SPVTV DY  QALV   L K    E + ++AEEDSK L    +Q+ +E      ++ L+    Y+  +     +   +D G  K +  S  R W LDPIDGT G L
Sbjct:   24 CLDIQKQLISEDTINKKDQSPVTVGDYTVQALVINELLKGL-DEEYPIIAEEDSKTL---SSQKDVE------SKVLSFFNRYSNESFVESQLSSLLDKGNKKKDLNSSNRWWTLDPIDGTLGFL 138          
The following BLAST results are available for this feature:
BLAST of EY720318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DPNP_SCHPO1.349e-1745.053'(2'),5'-bisphosphate nucleotidase OS=Schizosacch... [more]
DPNPM_ARATH1.649e-1541.86Putative PAP-specific phosphatase, mitochondrial O... [more]
HAL2_YEAST3.439e-1338.213'(2'),5'-bisphosphate nucleotidase OS=Saccharomyc... [more]
DPNP_DICDI4.966e-1238.403'(2'),5'-bisphosphate nucleotidase OS=Dictyosteli... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-G10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720318 ID=EY720318; Name=EY720318; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGCCCAAACCCAAACCCAAAACACAACAGTCTAGTTCGCTG
GTTGTGTCTTCAATTGTAATGTCTTACGATAAGGAACTTGCTGCTGCCAA
AAAAGTTGCTTCTCTTGCTGCCCGTCTCTGCCTGAAAGTGCAAAAAGCTC
TGCTGCAGTCTGACGTGCAATCTAAAAATGATAAAAGTCCTGTAACTGTT
GCTGATTACGGATCGCAAGCATTGGTTAGTTTCGCACTGCAGAAGGAATT
TCCTTCTGAACCATTTTCACTAGTAGCAGAGGAGGATTCCAAAGATCTAC
GTCAGGATGGTGCCCAGGAAACACTAGAGCGCATTACTAAACTTGTAAAC
GAGACTCTAGCCAGCGATGGAGCATATAACACTTCTACTTTATCTACGGA
AGATGTTATCAGGGCCATTGACGGTGGCAAATCTGAAGGTGGTTCACATG
GCCGACATTGGGTTTTAGATCCTATAGATGGCACTAAAGGAGTATTGGGC
CTCCTACCTTTGTGATACTTTTCAACAGTTACTACCCAAATGTTGATCAA
TTGAATGGTGATGGATACTGCAAATNTATTGATCGAAAGAAATTGTTATT
GTCAGCTGGAGTATGCTTCATTCCAAATAAGTGCATTATGCTGGATTTTT
GAGTTCATGAATAANATTCCAGCCATTATGTCTCTAGGTTTGTAAGAGGA
GATCAATATGCTATTGCATTACCATNGCTTGATGAAGGCNNAAGTGTATT
GGGTGTACTGGNCTGTCCCANTCTTCCCTTANCATCCATTGTGGGTGANC
ATCAGCATTCTTCAAATAATGAAGTCGGTTGCCTTTTTTTGCACAAGTGG
TGCCGGAACTATATGCAGTCCTGAGTGGGT
back to top