EY720285

Overview
NameEY720285
Unique NameEY720285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 6.940e-62
Identity = 110/164 (67.07%), Postives = 135/164 (82.32%), Query Frame = 2
Query:  212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIR 703
            A  Q+ VR+A+N  +DEE+  D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA  GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G   VPIVFRGPNGA+AGV AQHSQC+AAWY   PGLKV+SP+ SEDA+GL+K+AIR
Sbjct:   29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIR 192          

HSP 2 Score: 25.0238 bits (53), Expect = 6.940e-62
Identity = 13/32 (40.62%), Postives = 16/32 (50.00%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVSPESLDSTCGFPLG 806
            +PVV LENE  YG      PE+       P+G
Sbjct:  195 NPVVVLENELMYGVPFEFPPEAQSKDFLIPIG 226          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.180e-61
Identity = 111/164 (67.68%), Postives = 136/164 (82.93%), Query Frame = 2
Query:  212 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIR 703
            A  Q+ VREA+N  +DEE+  D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA  GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G  +VPIVFRGPNGA+AGV AQHSQC+AAWY   PGLKV+SP+ SEDA+GL+K+AIR
Sbjct:   29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIR 192          

HSP 2 Score: 22.7126 bits (47), Expect = 1.180e-61
Identity = 12/32 (37.50%), Postives = 16/32 (50.00%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVSPESLDSTCGFPLG 806
            +PVV LENE  YG    +  E+       P+G
Sbjct:  195 NPVVVLENELMYGVPFELPSEAQSKDFLIPIG 226          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.008e-61
Identity = 110/168 (65.48%), Postives = 138/168 (82.14%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q+ VREAL  A+ EEM  D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+  PIVFRGPNGAA+ V AQHSQ YAA Y+ +PGLKV++PY +ED +GL+  AIR      F
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIF 169          

HSP 2 Score: 26.1794 bits (56), Expect = 2.008e-61
Identity = 11/19 (57.89%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVS 767
            +PV+FLENE  YG S  +S
Sbjct:  165 NPVIFLENEILYGHSFDIS 183          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 5.803e-61
Identity = 110/168 (65.48%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q+ VREAL  A+ EEM  D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ   PIVFRGPNGAA+ V AQHSQ Y A Y+ VPGLKV++PY +ED +GL+  AIR      F
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIF 169          

HSP 2 Score: 26.9498 bits (58), Expect = 5.803e-61
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVSPESLD 782
            +PV+FLENE  YG S  V PE+++
Sbjct:  165 NPVIFLENEILYGHSFDV-PETIE 187          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.677e-60
Identity = 108/168 (64.29%), Postives = 136/168 (80.95%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q+ VREAL  A+ EEM  D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+  PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PY +ED +GL+  AIR      F
Sbjct:    2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVF 169          

HSP 2 Score: 25.7942 bits (55), Expect = 1.677e-60
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVSPESLD 782
            +PVVFLENE  YG S  V P++++
Sbjct:  165 NPVVFLENEILYGHSFDV-PKTIE 187          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 4.832e-60
Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q  +REAL  A+ EEM  D +VF+MGEEV EYQGAYK+++GLL+++G  RV+DTPI+E GF+GIGVGAA  GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+  PIVFRGPNGAA  VGAQH+Q +  WYA+VPGL VL+PY + DA+GLLKAAIR      F
Sbjct:  138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVF 305          

HSP 2 Score: 23.0978 bits (48), Expect = 4.832e-60
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPV 764
            DPVVFLE E  YG++  V
Sbjct:  301 DPVVFLECELLYGKTFDV 318          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.381e-59
Identity = 107/168 (63.69%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q+ VREAL  A+ EEM  D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+  PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PY +ED +GL+  AIR      F
Sbjct:    2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIF 169          

HSP 2 Score: 25.0238 bits (53), Expect = 2.381e-59
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPV 764
            +PV+FLENE  YG S  V
Sbjct:  165 NPVIFLENEILYGHSFDV 182          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.381e-59
Identity = 107/168 (63.69%), Postives = 135/168 (80.36%), Query Frame = 2
Query:  221 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            Q+ VREAL  A+ EEM  D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+  PIVFRGPNGAA+ V AQHSQ Y A Y+ +PGLKV++PY +ED +GL+  AIR      F
Sbjct:    2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIF 169          

HSP 2 Score: 25.0238 bits (53), Expect = 2.381e-59
Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPV 764
            +PV+FLENE  YG S  V
Sbjct:  165 NPVIFLENEILYGHSFDV 182          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 8.962e-59
Identity = 106/171 (61.99%), Postives = 131/171 (76.61%), Query Frame = 2
Query:  191 NLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIR 703
            ++R  +S    + VR+ALN+ALDEE+  D +VFL+GEEV +Y GAYKISKGL +KYG  R+ DTPITE    G+ VGAA  GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS+G+  VPIVFRG NGAA GV  QHSQ + AW+   PG+KV+ PY  EDARGLLKAA+R
Sbjct:   23 SVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVR 193          

HSP 2 Score: 30.8018 bits (68), Expect = 8.962e-59
Identity = 15/32 (46.88%), Postives = 18/32 (56.25%), Query Frame = 3
Query:  711 DPVVFLENES*YGESSPVSPESLDSTCGFPLG 806
            +PV+ LENE  YG   PVSPE+       P G
Sbjct:  196 NPVICLENEILYGMKFPVSPEAQSPDFVLPFG 227          
BLAST of EY720285 vs. ExPASy Swiss-Prot
Match: ODPB_CHAVU (Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris GN=pdhB PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.762e-39
Identity = 76/170 (44.71%), Postives = 112/170 (65.88%), Query Frame = 2
Query:  215 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQIAVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYRSEDARGLLKAAIRGPGSCCF 724
            + + ++ EALN  + EE+  DPKVF++GE++G Y G+YK++KGL EKYG  R+LDTPI E  FTGI +GAA  GL+P++E M   F + A + I N+A   +Y S G    P+V RGP G    +GA+HSQ   +++ SVPGL++++     +A+GL+K+AIR      F
Sbjct:    1 MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAENSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGGVGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIF 170          
The following BLAST results are available for this feature:
BLAST of EY720285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
ODPB_HUMAN6.940e-6267.07Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_BOVIN1.180e-6167.68Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RICBR2.008e-6165.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICFE5.803e-6165.48Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICCN1.677e-6064.29Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_ZYMMO4.832e-6066.67Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICTY2.381e-5963.69Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_RICPR2.381e-5963.69Pyruvate dehydrogenase E1 component subunit beta O... [more]
ODPB_ASCSU8.962e-5961.99Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_CHAVU2.762e-3944.71Pyruvate dehydrogenase E1 component subunit beta O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-004-D09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720285 ID=EY720285; Name=EY720285; organism=Citrus sinensis; type=EST; length=871bp
CACCACGCGTCCGTAGAATTTCGTGCTCTTCGTGTGGGCTGTGCGTTGCA
ACTTTCAACCTATTTCCCTCTCCACGGCGATCGGATCGCTGATAACTTTC
ACTTCTGAGTTGAAGATGTGGGGAATTATTAGGCAGAAAGTGGCTGCTGG
AGGAGGTTCTCCTGTTGCGAGAATTCGCCCTGTGGTATCCAATTTGAGAA
ACTACTCATCTGCAGTTAAACAGATGATGGTGAGAGAGGCTTTAAACTCT
GCTCTTGATGAGGAGATGTCTGCTGATCCTAAAGTTTTCTTGATGGGAGA
AGAGGTTGGGGAATATCAGGGTGCTTACAAGATATCCAAAGGGCTATTGG
AGAAATATGGCCCTGAGAGAGTTCTTGATACCCCGATCACTGAGGCTGGT
TTTACTGGGATTGGAGTTGGTGCTGCATACTATGGTTTGAAGCCTGTTGT
GGAATTCATGACATTTAACTTCTCTATGCAGGCAATTGATCACATCATTA
ATTCTGCTGCAAAATCAAATTACATGTCTTCTGGCCAAATAGCGGTTCCT
ATCGTCTTCAGAGGGCCTAATGGTGCTGCTGCCGGAGTGGGTGCCCAACA
CTCTCAATGTTATGCAGCATGGTATGCCTCAGTCCCTGGGTTGAAAGTAC
TGAGCCCATACCGTTCTGAAGATGCTCGTGGACTGCTAAAAGCTGCTATA
AGGGGTCCCGGATCCTGTTGTTTTTCTTGAAAATGAGTCGTAATATGGTG
AGTCATCCCCGGTATCACCTGAAAGTCTTGATTCCACTTGTGGCTTCCCG
TTGGGAAGCTAACATGGGAGAGAAGGAAGATGTACTATCACGCTTCCCCC
AAATGGGGGCTTCATCCACGC
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