EY720211

Overview
NameEY720211
Unique NameEY720211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAAB (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:  415 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A+E DTVE
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVE 67
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAA8 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain NCTC 8325) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:  415 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A+E DTVE
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVE 67
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAA3 (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain USA300) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:  415 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A+E DTVE
Sbjct:    6 VPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVE 67
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAES (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:  400 LVDAVVPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            + +  VP + ESIT+GT+A++LK  GD V+  E I ++ETDKV ++V S +AGV+ + +A E DTVE
Sbjct:    1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEGDTVE 67
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAEQ (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1 
Query:  400 LVDAVVPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            + +  VP + ESIT+GT+A++LK  GD V+  E I ++ETDKV ++V S +AGV+ + +A E DTVE
Sbjct:    1 MAEVKVPELAESITEGTIAEWLKNVGDNVDKGEAILELETDKVNVEVVSEEAGVLSEQLAEEGDTVE 67
[Close]
BLAST of EY720211 vs. ExPASy Swiss-Prot
Match: ODO2_STAAR (Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=odhB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:  415 VPFMGESITDGTLAKFLKQPGDRVEIDEPIAQIETDKVTIDVASPQAGVIHKLIANERDTVE 600
            VP + ESIT+GT+A++LK  GD VE  E I ++ETDKV ++V S +AGV+ + +A+E DTVE
Sbjct:    6 VPELAESITEGTIAEWLKNLGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLASEGDTVE 67
The following BLAST results are available for this feature:
BLAST of EY720211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ODO2_STAAB5.553e-1153.23Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA85.553e-1153.23Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAA35.553e-1153.23Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAES7.253e-1147.76Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAEQ7.253e-1147.76Dihydrolipoyllysine-residue succinyltransferase co... [more]
ODO2_STAAR7.253e-1153.23Dihydrolipoyllysine-residue succinyltransferase co... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-E12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720211 ID=EY720211; Name=EY720211; organism=Citrus sinensis; type=EST; length=882bp
CCACGCGTCCGGAGAAAGTTCTGTACATCGCAAGTCGTCTCTCTCTCTGA
GTCTTGTAAAATTATCTCAGATTCATTTTTATTCATTCACATCTAAAAAG
AAAAATAAATAAAGCACATAGTTTTTTCGGAAATGATTTGGGGAATTGTT
CGCCGCAAAATCACTTCGGCTCAAGTGATTGGACAATCAGTGTCAAAGAT
TGGGCCAAGATGTCACGCGACTGCGCAAAAGGAGGCTATACTCACTTGCA
GAGGTTTTCAGCGTGTTCAGCGTTCTAGCTATCACATTTTGTCAGGGAAT
TATGTTTGTTCGACGCCAAGAAGCGAAGTAATTGAGCTGATACAGAAAGG
ATCTTTTATTGGATCGAGAAGTAGATTGTTTTCTTCAGATAGTGGAGACC
TGGTTGATGCTGTTGTTCCCTTCATGGGTGAATCCATTACTGATGGAACA
TTGGCGAAGTTTTTGAAGCAACCTGGAGATAGAGTTGAAATTGATGAGCC
CATTGCTCAAATTGAAACCGATAAGGTGACAATTGATGTGGCTAGTCCTC
AAGCCGGTGTGATCCACAAGCTTATAGCCAACGAACGTGATACTGTGGAA
ACCAGTTGCACAGATTGCCGTTACTCCCACATCACGTGAAAGTGTGGGTC
AACCTGCTCCACCACAATAACGTGCAGCTCATACTCCACTGCTGTAGAAA
AGCCGTGTGTGGGGAAGCACACCCTGAAGTCGGCAGCGGCCCTGCAGTGG
AAGAGTGTCACCCTCTGAACCCCTTCCTAAAGCCAAAAACCTTGATGAGA
ATTCACACCCTGGTCTCCAACCCTCGCCTCCTCCCCCGGCAACAAAGACA
AGGCCCCCATGACAGACTTAGTGAATGGTCCC
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