EY720206

Overview
NameEY720206
Unique NameEY720206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720206 vs. ExPASy Swiss-Prot
Match: DAPAT_CARHZ (LL-diaminopimelate aminotransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dapL PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = -3
Query:  150 LDDGDQVLVPTPYWPSFPDSVRFNGGE----PVFIECGLGQGCKLLPAQLEQHINQRTRWLILNGPGNPSGAVYSEVELQALAEVLRRHPQVLVLLDELYEHIRFDGRPAQSLLNVAPDLQDRCLLVGGVSKTYAMTGWRIGFGAGPQTLTNAM 599
            +D GD VLVP P +P +       GG     P+  E G       +P    + + ++ + + +N P NP+GAV      + +    +++ ++LV  D  Y  I FDG  A S L V    +D  +    +SKTY MTGWRIG+  G     +A+
Sbjct:  113 VDPGDLVLVPDPGYPVYEGGTILAGGTTYKMPLKPENGFLPDLDSIP----EEVARKAKLMFINYPNNPTGAVADLGFFEKVVHFAKKY-EILVCHDAAYSEITFDGYRAPSFLEVK-GAKDVGIEFHSLSKTYNMTGWRIGWAVGNAKAIDAL 260          
BLAST of EY720206 vs. ExPASy Swiss-Prot
Match: DAPAT_SYNFM (LL-diaminopimelate aminotransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dapL PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = -3
Query:  174 ATLDDGDQVLVPTPYWPSFPDSVRFNGGEPVFI----ECGLGQGCKLLPAQLEQHINQRTRWLILNGPGNPSGAVYSEVELQALAEVLRRHPQVLVLLDELYEHIRFDGRPAQSLLNVAPDLQDRCLLVGGVSKTYAMTGWRIGFGAG 605
            A ++ GD  LVPTP +P +  +  F GGE  F+    E G       +PA     + +R + + +N P NP+GA  +E +         R   V+V  D  Y  + F G    S L + P   +  +    +SKTY MTGWR+GF  G
Sbjct:  113 AVINPGDLALVPTPAYPVYHVATMFAGGESYFMPLVRENGFLPDLDSIPAD----VARRAKVMFINYPNNPTGAT-AERDFFEKVIAFAREYDVIVCHDAAYTEMAFGGYRPLSFLEL-PGAGEVGVEFHSLSKTYNMTGWRLGFAVG 254          
BLAST of EY720206 vs. ExPASy Swiss-Prot
Match: AAT3_BACSU (Putative aspartate aminotransferase yhdR OS=Bacillus subtilis GN=yhdR PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 53/195 (27.18%), Postives = 86/195 (44.10%), Query Frame = -3
Query:  183 YTPTPGVKALRVAVQRKLAEENHLDYSLPNIVIANGAXQIXFXAFAATLDDGDQVLVPTPYWPSFPDSVRFNGGEPVFIECGLGQGCKLLPAQLEQHINQRTRWLILNGPGNPSGAVYSEVELQALAEVLRRHPQ-----VLVLLDELYEHIRFD---GRPAQSLLNVAPDLQDRCLLVGGVSKTYAMTGWRIGF 743
            Y    G+ A R  V + L      D+S   IV+  GA      A  + ++ G++V++  PY+  +   +   GG+ V   C L    ++    + Q I  +T+ LILN P NP+G V S+  +  L  +L+   +     + VL DE Y  + +D     P QS          R +L    SK   + G R+G+
Sbjct:   70 YIQNQGLLAAREKVAQFLGSRFEADFSAERIVMTVGAGGALNVALKSIVNPGEEVIILAPYFAEYKLYIENYGGKAV--SCPLTSRFEIDIEAVRQSITPQTKGLILNTPHNPTGTVLSQKNIDDLGALLKEIEEKSGQTIYVLFDEPYSQLIYDEELANPFQS--------YHRVILASSFSKDLGIAGERLGY 254          
The following BLAST results are available for this feature:
BLAST of EY720206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
DAPAT_CARHZ5.585e-1131.17LL-diaminopimelate aminotransferase OS=Carboxydoth... [more]
DAPAT_SYNFM7.294e-1132.43LL-diaminopimelate aminotransferase OS=Syntrophoba... [more]
AAT3_BACSU7.294e-1127.18Putative aspartate aminotransferase yhdR OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-003-E06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720206 ID=EY720206; Name=EY720206; organism=Citrus sinensis; type=EST; length=889bp
GTGCCGAGGGCCATCATCAGCAGGTCCCGGCGCAGTTGATAGGCCGCTAC
CTGCTCGGCGAGGAAACCCAGCCCGCCGGTGAATGCGGCCAACGCGGCGG
CTTGCCCGACGGAAGATGCGCCGGAAGTGGATTGCGACTGAACAACCGCC
ATTGCATTGGTCAAGGTCTGTGGCCCCGCGCCGAAACCGATGCGCCAGCC
GGTCATGGCGTAGGTCTTGGACACGCCGCCTACCAGCAGGCAACGGTCCT
GCAAATCCGGTGCGACGTTCAGCAGGCTCTGGGCCGGGCGACCGTCGAAA
CGAATGTGTTCGTAGAGTTCATCCAGCAGCACCAGCACCTGGGGATGGCG
ACGCAGCACCTCAGCCAGCGCTTGCAGTTCAACCTCGCTGTACACGGCGC
CGCTCGGGTTGCCCGGGCCGTTAAGGATCAGCCAGCGGGTGCGCTGATTG
ATGTGCTGCTCCAGTTGAGCCGGCAGCAGCTTGCAGCCCTGCCCCAGCCC
GCACTCGATAAACACCGGTTCGCCACCGTTGAACCGCACGCTGTCAGGGA
AAGACGGCCAGTACGGCGTCGGCACCAGCACTTGATCGCCGTCGTCGAGG
GTGGCGGCGAAGGCGTNGAANATGATCTGTNTCGCGCCGTTGGCGATCAC
GATGTTTGGCAGTGAATAGTCCAGGTGGTTTTCTTCGGCCAGCTTGCGCT
GCACCGCGACGCGCAAAGCTTTTACACCGGGTGTCGGCGTGTATTTGGGG
GCCGCCGCANCGATGGCGGCGTATGCCGCTTGTTTTGATGTGCTCCGGGG
GTGTCCAAGCTGGGCTCCCCGGTGGGCAGGTCCAAAATGTCGCGGCCCCG
ATCACCCACGTCCCGTGGGCCGGGATTTGGCCCCGGTGT
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