EY720144

Overview
NameEY720144
Unique NameEY720144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_THEEB (Queuosine biosynthesis protein queC OS=Thermosynechococcus elongatus (strain BP-1) GN=queC PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.949e-16
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 2
Query:  296 MTDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR 481
            M   ++AV+LLSGGLDS+TV+  A+A GY+CY +SFDYGQ                GVVEH+
Sbjct:    1 MVTTQKAVVLLSGGLDSSTVLFRAKALGYACYALSFDYGQRHRRELEAAIAIATSAGVVEHQ 62          

HSP 2 Score: 33.113 bits (74), Expect = 1.949e-16
Identity = 22/48 (45.83%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQG-----PSEGIPGD*VAARYHVLL 606
            Q++ LNL   GGSALTD SID+P+       S+ IP   V AR  + L
Sbjct:   62 QILPLNLRLWGGSALTDLSIDLPRDRDLATMSQEIPVTYVPARNTIFL 109          

HSP 3 Score: 31.9574 bits (71), Expect = 1.949e-16
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCE 725
            V AL Y+GYPDCRP Y+ + +
Sbjct:  128 VNALDYSGYPDCRPDYIAAMQ 148          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ANADF (Queuosine biosynthesis protein queC OS=Anaeromyxobacter sp. (strain Fw109-5) GN=queC PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.949e-16
Identity = 27/58 (46.55%), Postives = 34/58 (58.62%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR 481
            KRAV+LLSGGLDS T +A+AR DG+  + +S DYGQ               LG  +HR
Sbjct:    7 KRAVVLLSGGLDSTTCLAVARRDGFEAHCLSVDYGQRHKGELARARRLSRALGAADHR 64          

HSP 2 Score: 38.891 bits (89), Expect = 1.949e-16
Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGATSPPWAVLNGRVL 773
            V A+ Y+GYPDCRP +L + ER AT    A + GR L
Sbjct:  130 VNAIDYSGYPDCRPAFLRAFERLATVATKAGVEGRPL 166          

HSP 3 Score: 32.7278 bits (73), Expect = 1.949e-16
Identity = 22/48 (45.83%), Postives = 28/48 (58.33%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQGPS-----EGIPGD*VAARYHVLL 606
            +V+ ++L   GGSALTD +I VP+G S       IP   V AR  VLL
Sbjct:   64 RVVKVDLSAFGGSALTDRAIAVPKGRSGRRRAAEIPVTYVPARNTVLL 111          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_METFK (Queuosine biosynthesis protein queC OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=queC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.169e-16
Identity = 46/118 (38.98%), Postives = 59/118 (50.00%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            K+AV+LLSGGLDSATV+A+AR  GY  Y +S DY Q               LG V HR      + +       A     + P++G  VT      T   +LAL W  +LEAR IF+G
Sbjct:    3 KKAVVLLSGGLDSATVLAIARHQGYDVYCLSLDYQQRHRAELQAADRVTKALGAVMHRTVKLDLSVFGGSALTDASIAVPEVPSEGIPVTYVPARNTIMLSLALAWAEVLEARDIFIG 120          

HSP 2 Score: 33.113 bits (74), Expect = 9.169e-16
Identity = 15/38 (39.47%), Postives = 22/38 (57.89%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGATSPPWAVLNGRVLA 776
            V AL Y+GYPDCR  Y+ + +  A     + + GR +A
Sbjct:  121 VNALDYSGYPDCRGEYVHAFQAMANLATKSAVEGRTIA 158          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ANASP (Queuosine biosynthesis protein queC OS=Anabaena sp. (strain PCC 7120) GN=queC PE=3 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.540e-15
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 2
Query:  311 RAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR 481
            +AVILLSGGLDS+T++  A+ADG  CY++SFDY Q                G+V+H+
Sbjct:    2 KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQ 58          

HSP 2 Score: 34.2686 bits (77), Expect = 1.540e-15
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCE 725
            V AL Y+GYPDCRP Y+E+ +
Sbjct:  124 VNALDYSGYPDCRPDYIEAMQ 144          

HSP 3 Score: 33.8834 bits (76), Expect = 1.540e-15
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQ-----GPSEGIPGD*VAARYHVLL 606
            QVI  +L   GGSALTD +ID+PQ       S+ IP   V AR  + L
Sbjct:   58 QVINFDLRLWGGSALTDDNIDLPQERSLDAMSQNIPVTYVPARNTIFL 105          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ANAVT (Queuosine biosynthesis protein queC OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=queC PE=3 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 2.580e-15
Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = 2
Query:  311 RAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR 481
            +AVILLSGGLDS+T++  A+ADG  CY++SFDY Q                G+V+H+
Sbjct:    2 KAVILLSGGLDSSTILYQAKADGCECYSISFDYQQRHRRELHSAFLVAQTAGIVQHQ 58          

HSP 2 Score: 34.2686 bits (77), Expect = 2.580e-15
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCE 725
            V AL Y+GYPDCRP Y+E+ +
Sbjct:  124 VNALDYSGYPDCRPDYIEAMQ 144          

HSP 3 Score: 33.113 bits (74), Expect = 2.580e-15
Identity = 21/48 (43.75%), Postives = 26/48 (54.17%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQ-----GPSEGIPGD*VAARYHVLL 606
            QV+  +L   GGSALTD  ID+PQ       S+ IP   V AR  + L
Sbjct:   58 QVVNFDLRLWGGSALTDDKIDLPQERSVDAMSQNIPVTYVPARNTIFL 105          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_CELJU (Queuosine biosynthesis protein queC OS=Cellvibrio japonicus (strain Ueda107) GN=queC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.702e-15
Identity = 47/129 (36.43%), Postives = 63/129 (48.84%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR----------*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            +K+AVIL+SGGLDS TV+A+AR+ GY CYT+SFDYGQ                G +EH+           S  T T+  V    T+       PA+           T   ++ALGW  +L A  IF+G
Sbjct:    3 RKKAVILVSGGLDSTTVIAIARSQGYDCYTISFDYGQRHRAELKAAEITAKAHGSLEHKVIRLDLGAIGGSALTDTSIDVPEEETSGIPVTYVPAR----------NTVFLSIALGWAEVLGALDIFIG 121          

HSP 2 Score: 31.5722 bits (70), Expect = 9.702e-15
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCE 725
            V A+ Y+GYPDCRP Y+ + E
Sbjct:  122 VNAVDYSGYPDCRPDYIAAYE 142          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_TRIEI (Queuosine biosynthesis protein queC OS=Trichodesmium erythraeum (strain IMS101) GN=queC PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.571e-14
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 2
Query:  311 RAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEH 478
            +AVILLSGGLDS+TV+  A+ADG  CY +SFDY Q               +GV+EH
Sbjct:    2 KAVILLSGGLDSSTVLYQAKADGCECYAISFDYQQRHLRELDSAKKIADTVGVIEH 57          

HSP 2 Score: 31.5722 bits (70), Expect = 1.571e-14
Identity = 19/47 (40.43%), Postives = 26/47 (55.32%), Query Frame = 1
Query:  481 VIGLNLDGMGGSALTDSSIDVP-----QGPSEGIPGD*VAARYHVLL 606
            ++  +L   GGSALTDS ID+P     +  S+ IP   V AR  + L
Sbjct:   59 IVSFDLRSWGGSALTDSQIDLPSDRDLEEMSQNIPITYVPARNTIFL 105          

HSP 3 Score: 31.5722 bits (70), Expect = 1.571e-14
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYL 713
            V AL Y+GYPDCRP Y+
Sbjct:  124 VNALDYSGYPDCRPDYI 140          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_FRASC (Queuosine biosynthesis protein queC OS=Frankia sp. (strain CcI3) GN=queC PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.618e-14
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 2
Query:  314 AVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEH 478
            AV+LLSGGLDSATV+A+A   G++C+ +SF YGQ               LGVV H
Sbjct:   17 AVVLLSGGLDSATVLAIANQQGFACHALSFRYGQRHEVELAAARRVASALGVVRH 71          

HSP 2 Score: 32.3426 bits (72), Expect = 2.618e-14
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1
Query:  481 VIGLNLDGMGGSALTDSSIDVP-QGPSEGIPGD*VAARYHVLLYPGPGL 624
            V+ ++L   GGSALTD +I VP  G +E IP   V AR  + L  G  L
Sbjct:   73 VVDIDLGVFGGSALTDPTIAVPAAGTAEEIPVTYVPARNTIFLSFGLAL 121          

HSP 3 Score: 32.3426 bits (72), Expect = 2.618e-14
Identity = 15/35 (42.86%), Postives = 20/35 (57.14%), Query Frame = 3
Query:  678 YAGYPDCRPYYLESCERGATSPPWAVLNGRVLASV 782
            Y+GYPDCRP YL + +  A     A ++G    SV
Sbjct:  139 YSGYPDCRPEYLAAYQAMANLATKATVSGERTLSV 173          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_METCA (Queuosine biosynthesis protein queC OS=Methylococcus capsulatus GN=queC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.768e-14
Identity = 47/122 (38.52%), Postives = 61/122 (50.00%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKA----PAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            K AV+LLSGGLDSAT +A+AR +G++C+ MSFDYGQ               LG +EH+    T    +     +A    R A    P  G  VT      T   + ALGW  +L A  IF+G
Sbjct:    2 KPAVVLLSGGLDSATTLAIARREGFACHAMSFDYGQRHGAELKAARRLAQSLGAIEHK----TVHIGLDAIGGSALTDLRIAVPDHPQNGIPVTYVPARNTVFLSFALGWAEVLGALDIFIG 119          

HSP 2 Score: 31.187 bits (69), Expect = 2.768e-14
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCER 728
            V A+ Y+GYPDCRP ++ + E+
Sbjct:  120 VNAVDYSGYPDCRPEFIRAFEQ 141          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ACIAD (Queuosine biosynthesis protein queC OS=Acinetobacter sp. (strain ADP1) GN=queC PE=3 SV=1)

HSP 1 Score: 43.1282 bits (100), Expect = 5.684e-14
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 2
Query:  311 RAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR 481
            RA++LLSGGLDS T +A A+A  Y C  +SF YGQ              + G VEHR
Sbjct:   10 RAIVLLSGGLDSTTCLAWAQA-RYECMALSFMYGQRSTTELDAAKAIAQNAG-VEHR 64          

HSP 2 Score: 42.3578 bits (98), Expect = 5.684e-14
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQGPSEGIPGD*VAARYHVLL 606
            +VI ++L  +GGSALTD +IDVP+   EGIP   V AR  + L
Sbjct:   64 RVINIDLANLGGSALTDHNIDVPEQLQEGIPVTYVPARNTIFL 106          

HSP 3 Score: 32.7278 bits (73), Expect = 5.684e-14
Identity = 15/37 (40.54%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGATSPPWAVLNGRVL 773
            V A+ Y+GYPDCRP Y+++    A     A + G+ L
Sbjct:  125 VNAVDYSGYPDCRPEYIQAFTNMARLATKAGVEGKPL 161          
The following BLAST results are available for this feature:
BLAST of EY720144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
QUEC_THEEB1.949e-1648.39Queuosine biosynthesis protein queC OS=Thermosynec... [more]
QUEC_ANADF1.949e-1646.55Queuosine biosynthesis protein queC OS=Anaeromyxob... [more]
QUEC_METFK9.169e-1638.98Queuosine biosynthesis protein queC OS=Methylobaci... [more]
QUEC_ANASP1.540e-1545.61Queuosine biosynthesis protein queC OS=Anabaena sp... [more]
QUEC_ANAVT2.580e-1545.61Queuosine biosynthesis protein queC OS=Anabaena va... [more]
QUEC_CELJU9.702e-1536.43Queuosine biosynthesis protein queC OS=Cellvibrio ... [more]
QUEC_TRIEI1.571e-1450.00Queuosine biosynthesis protein queC OS=Trichodesmi... [more]
QUEC_FRASC2.618e-1449.09Queuosine biosynthesis protein queC OS=Frankia sp.... [more]
QUEC_METCA2.768e-1438.52Queuosine biosynthesis protein queC OS=Methylococc... [more]
QUEC_ACIAD5.684e-1445.61Queuosine biosynthesis protein queC OS=Acinetobact... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720144 ID=EY720144; Name=EY720144; organism=Citrus sinensis; type=EST; length=853bp
CTCCAGACCCCCGGGTCCAAGGAAGCGCACCGCAACCGCTACGAGAACAT
CGAGTTGCTGACGGCCAACGACCAGGTCAAGTTCGTCATCTGTTCCCGTG
AAGACTACGACTGGGCGACCTCCAAGCTGATCCAATATGGCCTGGACCGC
CGTGCCGGCGAAGTGCTGTTTTCCCCCAGCCATCATGACCTGAATGCTCG
CGACCTGGCTGACTGGGTTGTCGCAGACAATCTGCCGGTGCGCCTGCAGC
TGCAGTTGCACAAGTACCTGTGGAACGACGAGCCGGGGCGCTGAGATGAC
TGATCAAAAGCGTGCTGTCATCCTGCTGTCCGGCGGCCTCGACTCCGCCA
CCGTGGTCGCCATGGCCCGTGCAGATGGCTACAGCTGCTACACCATGAGC
TTCGACTACGGCCAGCGTCACCGTGCCGAGCTGGAGGCTGCTGCCCGCGT
CGCCCGAGACCTGGGCGTGGTGGAGCACAGGTGATCGGGCTGAACCTCGA
CGGCATGGGTGGTTCGGCGCTGACCGACAGCTCCATAGACGTGCCGCAAG
GCCCCAGCGAAGGGATCCCGGGTGACTAAGTGGCTGCGCGGTACCACGTC
CTGCTGTACCCTGGCCCTGGGTTGGGGCCGAATTCTCGAGGCGCGCCACA
TTTTCGTCGGCGGTCACCGCCCTGTATTACGCCGGGTACCCGGACTGCCG
CCCCTATTATCTCGAGTCCTGCGAGCGCGGGGCCACCTCCCCACCATGGG
CGGTGTTAAATGGGCGGGTTTTGGCTTCTGTGCGCCGCGTGGGAAACGGT
GCGCGGGCGAGGTCCTGACAGGGCGGCGCAGGGCAGGGGCGCTCTGCCCC
GCG
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