EY720144

Overview
NameEY720144
Unique NameEY720144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_LEGPC (Queuosine biosynthesis protein queC OS=Legionella pneumophila (strain Corby) GN=queC PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.687e-12
Identity = 22/36 (61.11%), Postives = 31/36 (86.11%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQ 415
            K+AV+LLSGGLDS T +A+A++ G++CY +SF YGQ
Sbjct:    2 KKAVVLLSGGLDSTTCLALAKSQGFACYALSFSYGQ 37          

HSP 2 Score: 30.0314 bits (66), Expect = 2.687e-12
Identity = 19/44 (43.18%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVPQ-GPSEGIPGD*VAARYHVLL 606
            +++ L+    GGSALTD+SI+VP+   S  IP   V AR  + L
Sbjct:   59 KIVTLDTALFGGSALTDASIEVPEFKESPEIPVTYVPARNTIFL 102          

HSP 3 Score: 27.7202 bits (60), Expect = 2.687e-12
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 3
Query:  678 YAGYPDCRPYYLESCERGATSPPWAVLNG 764
            Y+ YPDCRP ++ES +  A     A + G
Sbjct:  126 YSHYPDCRPEFIESFQSLANLATKAGIEG 154          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_SYNY3 (Queuosine biosynthesis protein queC OS=Synechocystis sp. (strain PCC 6803) GN=queC PE=3 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 9.680e-12
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEH 478
            K AV+LLSGGLDSATV A+A+ +GY    +SF+YGQ               LG+ EH
Sbjct:    3 KTAVVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRHDRELRAAADIVQALGIPEH 59          

HSP 2 Score: 32.7278 bits (73), Expect = 9.680e-12
Identity = 14/35 (40.00%), Postives = 21/35 (60.00%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGATSPPWAVLNGR 767
            + A+ Y+GYPDCRP YL + ++ A       + GR
Sbjct:  123 INAIDYSGYPDCRPEYLATYQQLAALSSKVGVEGR 157          

HSP 3 Score: 24.2534 bits (51), Expect = 9.680e-12
Identity = 15/37 (40.54%), Postives = 19/37 (51.35%), Query Frame = 1
Query:  484 IGLNLDGMGGSALTDSSIDVPQG-------PSEGIPG 573
            I L+L   GGS+LTD    +PQ        PS  +PG
Sbjct:   62 INLDLAQWGGSSLTDRQQTLPQTGVEPDIIPSTYVPG 98          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_THIDA (Queuosine biosynthesis protein queC OS=Thiobacillus denitrificans (strain ATCC 25259) GN=queC PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 52/168 (30.95%), Postives = 69/168 (41.07%), Query Frame = 2
Query:  314 AVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVGGHXXXXXXXXXXXXXXXXXXXARGHLPTMGGVKWAGFGFCAPRGKRCAGEVL 817
            A++LLSGGLDSAT +AMAR  G++C+ +S DYGQ               LG VEHR        +       A     ++P  G  VT      T    LAL W  +L AR IF+G +                      +L T  GV+ A     AP       E++
Sbjct:    5 AIVLLSGGLDSATALAMAREAGFACHALSLDYGQRHTAELAAAARLAAQLGAVEHRVIRLGLGDFGGSALTDASIAVPESPVAGIPVTYVPARNTVMLALALAWAEVLGARDIFIGVNAVDYSGYPDCRPEFIEAFERMANLATKAGVEGAQLRIHAPLQHLSKAEII 172          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ACAM1 (Queuosine biosynthesis protein queC OS=Acaryochloris marina (strain MBIC 11017) GN=queC PE=3 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 1.252e-11
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2
Query:  311 RAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQ 415
            +AV+LLSGGLDS+T +  A+ADG  CY +SFDY Q
Sbjct:    2 KAVVLLSGGLDSSTALYKAKADGADCYAISFDYRQ 36          

HSP 2 Score: 30.4166 bits (67), Expect = 1.252e-11
Identity = 18/47 (38.30%), Postives = 27/47 (57.45%), Query Frame = 1
Query:  478 QVIGLNLDGMGGSALTDSSIDVP----QGPSEGIPGD*VAARYHVLL 606
            Q++  +L   GGSALTD+ ID+P    +  ++ IP   V AR  + L
Sbjct:   58 QIVAFDLTLWGGSALTDTQIDLPSRSIEEMADHIPVTYVPARNSIFL 104          

HSP 3 Score: 29.6462 bits (65), Expect = 1.252e-11
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCE 725
            V  L Y+GYPDCRP ++++ +
Sbjct:  123 VNQLDYSGYPDCRPDFIQAMQ 143          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_SYNFM (Queuosine biosynthesis protein queC OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=queC PE=3 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 1.615e-11
Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEH 478
            +++AV+L SGG+DS T +A+A+A+G+  Y +SF Y Q               LG  EH
Sbjct:    6 RRKAVVLFSGGIDSTTCLAVAKAEGFEAYALSFFYHQRHGVEVEAARRSAPALGAREH 63          

HSP 2 Score: 37.7354 bits (86), Expect = 1.615e-11
Identity = 21/52 (40.38%), Postives = 26/52 (50.00%), Query Frame = 3
Query:  627 AEFSRRATFSSAVTALYYAGYPDCRPYYLESCERGATSPPWAVLNGRVLASV 782
            AE    A     V AL Y+GYPDCRP Y+ + ER A       + GR+   V
Sbjct:  117 AEVLGAADIFIGVNALDYSGYPDCRPEYIAAFERMANLAIRETVEGRMRIKV 168          

HSP 3 Score: 25.409 bits (54), Expect = 1.615e-11
Identity = 20/46 (43.48%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  481 VIGLNLDGMGGSALT---DSSIDVP-QGPSEGIPGD*VAARYHVLL 606
            V+ L LD +GGSALT   +   DVP +  S+ IP   V AR  + L
Sbjct:   65 VLELPLDRIGGSALTGHEEVPKDVPVEKMSDRIPATYVPARNTIFL 110          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_COXBR (Queuosine biosynthesis protein queC OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=queC PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.910e-11
Identity = 42/123 (34.15%), Postives = 58/123 (47.15%), Query Frame = 2
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTA-P*TCRKAPAKGSR----VTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            K+AVIL+SGGLDS T +A+A++ G+SCY +SFDYGQ                 VV H       T  + +   +A        P  G      +T      T   ++ALGW  IL+A  I +G
Sbjct:    2 KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRHE----VVTLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDAESILIG 120          

HSP 2 Score: 30.0314 bits (66), Expect = 1.910e-11
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  666 TALYYAGYPDCRPYYL 713
            +A+ Y+GYPDCRP Y+
Sbjct:  122 SAIDYSGYPDCRPEYI 137          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_SYNPX (Queuosine biosynthesis protein queC OS=Synechococcus sp. (strain WH8102) GN=queC PE=3 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 2.093e-11
Identity = 28/68 (41.18%), Postives = 33/68 (48.53%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAW 508
            Q+ +V LLSGGLDSAT  AMA  +G     +SFDYGQ               LG+ EH        AW
Sbjct:    3 QRTSVALLSGGLDSATAAAMALEEGDRVIGLSFDYGQRHHRELEAAAAVASHLGLAEHHCLAVDLAAW 70          

HSP 2 Score: 31.187 bits (69), Expect = 2.093e-11
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYL 713
            V A+ Y+GYPDCRP YL
Sbjct:  124 VNAVDYSGYPDCRPDYL 140          

HSP 3 Score: 29.6462 bits (65), Expect = 2.093e-11
Identity = 22/56 (39.29%), Postives = 30/56 (53.57%), Query Frame = 1
Query:  484 IGLNLDGMGGSALTDSSIDVP-QGPSEG-IPGD*VAARYHVLLYPGPGLGPNSRGA 645
            + ++L   GGSALTD ++ +P  G  EG IP   V  R  V +  G  L   +RGA
Sbjct:   63 LAVDLAAWGGSALTDDAVTIPTDGVQEGVIPPTYVPGRNTVFIAVGLSLA-EARGA 117          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_SYNR3 (Queuosine biosynthesis protein queC OS=Synechococcus sp. (strain RCC307) GN=queC PE=3 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 4.519e-11
Identity = 26/64 (40.62%), Postives = 31/64 (48.44%), Query Frame = 2
Query:  317 VILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAW 508
            + LLSGGLDSAT  A+AR  G+    +SFDYGQ               LG+ EH        AW
Sbjct:    6 IALLSGGLDSATAAALAREAGHRVIGLSFDYGQRHQRELRAAAEVAQALGLAEHHTINVNLAAW 69          

HSP 2 Score: 32.7278 bits (73), Expect = 4.519e-11
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLES 719
            V A+ Y+GYPDCRP YL++
Sbjct:  123 VNAIDYSGYPDCRPDYLDA 141          

HSP 3 Score: 28.1054 bits (61), Expect = 4.519e-11
Identity = 23/56 (41.07%), Postives = 29/56 (51.79%), Query Frame = 1
Query:  484 IGLNLDGMGGSALTDSSIDVP-QGPSEG-IPGD*VAARYHVLLYPGPGLGPNSRGA 645
            I +NL   GGS+LTD    VP QG  +G IP   V  R  V +  G  L   ++GA
Sbjct:   62 INVNLAAWGGSSLTDLDQPVPDQGVQDGVIPSTYVPGRNTVFIALGLSLA-EAKGA 116          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_ANADE (Queuosine biosynthesis protein queC OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=queC PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 5.416e-11
Identity = 43/131 (32.82%), Postives = 58/131 (44.27%), Query Frame = 2
Query:  299 TDQKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR----------*SG*TSTAWVVRR*PTAP*TCRKAPAKGSRVTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            ++ +RAV+LLSGGLDS+T +A+ARA+G   + +S DYGQ               LG   HR           S  T  A  V +  +     R  P     VT      T   +LAL    ++ A  IFVG
Sbjct:    6 SEARRAVVLLSGGLDSSTCLAVARAEGLEAHCLSVDYGQRHKGELARARRIARALGAAGHRVVKVDLSAFGGSALTDAAIAVPKGRSEARMARDIP-----VTYVPARNTVMLSLALAHAEVIGAEQIFVG 131          

HSP 2 Score: 34.6538 bits (78), Expect = 5.416e-11
Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGATSPPWAVLNGRVL 773
            V A+ Y+GYPDCRP +L + ER A     A + G  L
Sbjct:  132 VNAIDYSGYPDCRPAFLHAFERLAKVATRAGVEGHPL 168          
BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_SYNS9 (Queuosine biosynthesis protein queC OS=Synechococcus sp. (strain CC9902) GN=queC PE=3 SV=1)

HSP 1 Score: 44.669 bits (104), Expect = 7.532e-11
Identity = 24/58 (41.38%), Postives = 30/58 (51.72%), Query Frame = 2
Query:  305 QKRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEH 478
            Q+ A+ LLSGGLDSAT  A+A+  G     +SFDYGQ               L + EH
Sbjct:    3 QRTAIALLSGGLDSATAAALAQEAGDRVIGLSFDYGQRHRRELKAAAKVAAHLNLAEH 60          

HSP 2 Score: 33.8834 bits (76), Expect = 7.532e-11
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 3
Query:  663 VTALYYAGYPDCRPYYLESCERGAT 737
            V A+ Y+GYPDCRP YL++ +  AT
Sbjct:  124 VNAVDYSGYPDCRPDYLDAFQTLAT 148          

HSP 3 Score: 28.8758 bits (63), Expect = 7.532e-11
Identity = 24/56 (42.86%), Postives = 29/56 (51.79%), Query Frame = 1
Query:  484 IGLNLDGMGGSALTDSSIDVP-QGPSEG-IPGD*VAARYHVLLYPGPGLGPNSRGA 645
            + +NL   GGSALTD +  VP  G  EG IP   V  R  V +  G  L   +RGA
Sbjct:   63 VDVNLGAWGGSALTDPNQTVPTSGVEEGVIPVTYVPGRNTVFIAIGLSLA-EARGA 117          
The following BLAST results are available for this feature:
BLAST of EY720144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
QUEC_LEGPC2.687e-1261.11Queuosine biosynthesis protein queC OS=Legionella ... [more]
QUEC_SYNY39.680e-1247.37Queuosine biosynthesis protein queC OS=Synechocyst... [more]
QUEC_THIDA1.056e-1130.95Queuosine biosynthesis protein queC OS=Thiobacillu... [more]
QUEC_ACAM11.252e-1162.86Queuosine biosynthesis protein queC OS=Acaryochlor... [more]
QUEC_SYNFM1.615e-1137.93Queuosine biosynthesis protein queC OS=Syntrophoba... [more]
QUEC_COXBR1.910e-1134.15Queuosine biosynthesis protein queC OS=Coxiella bu... [more]
QUEC_SYNPX2.093e-1141.18Queuosine biosynthesis protein queC OS=Synechococc... [more]
QUEC_SYNR34.519e-1140.63Queuosine biosynthesis protein queC OS=Synechococc... [more]
QUEC_ANADE5.416e-1132.82Queuosine biosynthesis protein queC OS=Anaeromyxob... [more]
QUEC_SYNS97.532e-1141.38Queuosine biosynthesis protein queC OS=Synechococc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720144 ID=EY720144; Name=EY720144; organism=Citrus sinensis; type=EST; length=853bp
CTCCAGACCCCCGGGTCCAAGGAAGCGCACCGCAACCGCTACGAGAACAT
CGAGTTGCTGACGGCCAACGACCAGGTCAAGTTCGTCATCTGTTCCCGTG
AAGACTACGACTGGGCGACCTCCAAGCTGATCCAATATGGCCTGGACCGC
CGTGCCGGCGAAGTGCTGTTTTCCCCCAGCCATCATGACCTGAATGCTCG
CGACCTGGCTGACTGGGTTGTCGCAGACAATCTGCCGGTGCGCCTGCAGC
TGCAGTTGCACAAGTACCTGTGGAACGACGAGCCGGGGCGCTGAGATGAC
TGATCAAAAGCGTGCTGTCATCCTGCTGTCCGGCGGCCTCGACTCCGCCA
CCGTGGTCGCCATGGCCCGTGCAGATGGCTACAGCTGCTACACCATGAGC
TTCGACTACGGCCAGCGTCACCGTGCCGAGCTGGAGGCTGCTGCCCGCGT
CGCCCGAGACCTGGGCGTGGTGGAGCACAGGTGATCGGGCTGAACCTCGA
CGGCATGGGTGGTTCGGCGCTGACCGACAGCTCCATAGACGTGCCGCAAG
GCCCCAGCGAAGGGATCCCGGGTGACTAAGTGGCTGCGCGGTACCACGTC
CTGCTGTACCCTGGCCCTGGGTTGGGGCCGAATTCTCGAGGCGCGCCACA
TTTTCGTCGGCGGTCACCGCCCTGTATTACGCCGGGTACCCGGACTGCCG
CCCCTATTATCTCGAGTCCTGCGAGCGCGGGGCCACCTCCCCACCATGGG
CGGTGTTAAATGGGCGGGTTTTGGCTTCTGTGCGCCGCGTGGGAAACGGT
GCGCGGGCGAGGTCCTGACAGGGCGGCGCAGGGCAGGGGCGCTCTGCCCC
GCG
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