EY720144

Overview
NameEY720144
Unique NameEY720144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720144 vs. ExPASy Swiss-Prot
Match: QUEC_COXBU (Queuosine biosynthesis protein queC OS=Coxiella burnetii GN=queC PE=3 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 9.143e-11
Identity = 41/123 (33.33%), Postives = 58/123 (47.15%), Query Frame = 2 
Query:  308 KRAVILLSGGLDSATVVAMARADGYSCYTMSFDYGQXXXXXXXXXXXXXXDLGVVEHR*SG*TSTAWVVRR*PTA-P*TCRKAPAKGSR----VTKWLRGTTSCCTLALGWGRILEARHIFVG 661
            K+AVIL+SGGLDS T +A+A++ G+SCY +SFDYGQ                 VV +       T  + +   +A        P  G      +T      T   ++ALGW  IL+A  I +G
Sbjct:    2 KKAVILISGGLDSTTCLAVAKSKGFSCYALSFDYGQKHHSELVAAEKIAAHFNVVRYE----VVTLSIGKLGGSALTDNSLDVPDYGGNESIPITYVPARNTIFLSIALGWAEILDAESILIG 120

HSP 2 Score: 30.0314 bits (66), Expect = 9.143e-11
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 3 
Query:  666 TALYYAGYPDCRPYYL 713
            +A+ Y+GYPDCRP Y+
Sbjct:  122 SAIDYSGYPDCRPEYI 137
The following BLAST results are available for this feature:
BLAST of EY720144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
QUEC_COXBU9.143e-1133.33Queuosine biosynthesis protein queC OS=Coxiella bu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720144 ID=EY720144; Name=EY720144; organism=Citrus sinensis; type=EST; length=853bp
CTCCAGACCCCCGGGTCCAAGGAAGCGCACCGCAACCGCTACGAGAACAT
CGAGTTGCTGACGGCCAACGACCAGGTCAAGTTCGTCATCTGTTCCCGTG
AAGACTACGACTGGGCGACCTCCAAGCTGATCCAATATGGCCTGGACCGC
CGTGCCGGCGAAGTGCTGTTTTCCCCCAGCCATCATGACCTGAATGCTCG
CGACCTGGCTGACTGGGTTGTCGCAGACAATCTGCCGGTGCGCCTGCAGC
TGCAGTTGCACAAGTACCTGTGGAACGACGAGCCGGGGCGCTGAGATGAC
TGATCAAAAGCGTGCTGTCATCCTGCTGTCCGGCGGCCTCGACTCCGCCA
CCGTGGTCGCCATGGCCCGTGCAGATGGCTACAGCTGCTACACCATGAGC
TTCGACTACGGCCAGCGTCACCGTGCCGAGCTGGAGGCTGCTGCCCGCGT
CGCCCGAGACCTGGGCGTGGTGGAGCACAGGTGATCGGGCTGAACCTCGA
CGGCATGGGTGGTTCGGCGCTGACCGACAGCTCCATAGACGTGCCGCAAG
GCCCCAGCGAAGGGATCCCGGGTGACTAAGTGGCTGCGCGGTACCACGTC
CTGCTGTACCCTGGCCCTGGGTTGGGGCCGAATTCTCGAGGCGCGCCACA
TTTTCGTCGGCGGTCACCGCCCTGTATTACGCCGGGTACCCGGACTGCCG
CCCCTATTATCTCGAGTCCTGCGAGCGCGGGGCCACCTCCCCACCATGGG
CGGTGTTAAATGGGCGGGTTTTGGCTTCTGTGCGCCGCGTGGGAAACGGT
GCGCGGGCGAGGTCCTGACAGGGCGGCGCAGGGCAGGGGCGCTCTGCCCC
GCG
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