EY720143

Overview
NameEY720143
Unique NameEY720143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3
Query:  480 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            +D + WRKYGQK +KGSPYPR YYRC SS GCP +K VERSS D  +L+ TY  +H+H  P
Sbjct:  307 NDGYRWRKYGQKSVKGSPYPRSYYRC-SSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMP 366          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 3
Query:  378 TSSPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSR 680
            T   KK+   ++R + V          K E     D + WRKYGQK +K SPYPR YYRC++ K C  +K+VERS  DPS+++ TY  +HNH  P+PST R
Sbjct:  108 TKQGKKKGEKKEREVRVAFMT------KSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPSIVITTYEGKHNH--PIPSTLR 199          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTS 677
            R + E+   +D   WRKYGQK  KG+P PR YYRC+ +  CP RKQV+R S D S+L+ TY   HNHP P+ +T+
Sbjct:  182 RSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATA 256          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.572e-16
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            R + E+   SD   WRKYGQK  KG+P PR YYRC+ + GCP RKQV+R + D ++L+ TY   HNHP P
Sbjct:  283 RARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLP 352          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.505e-16
Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPL 665
            D + WRKYGQK +K SPYPR YYRC ++ GC  +K+VERSS DPS+++ TY  +H HP+P+
Sbjct:  222 DGYRWRKYGQKAVKNSPYPRSYYRC-TTVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFPM 281          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 9.505e-16
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTS 677
            R + ++   +D   WRKYGQK  KG+P PR YYRC+ + GCP RKQV+R + D ++L  TY   HNHP P  +T+
Sbjct:  230 RARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATA 304          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.612e-15
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            D + WRKYGQK +K SPYPR YYRC++ K C  +K+VERS  DP++++ TY  +HNHP P
Sbjct:  184 DGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSYQDPTVVITTYESQHNHPIP 242          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.717e-15
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  459 KGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            K E     D + WRKYGQK +K SPYPR YYRC++ K C  +K+VERS  DP++++ TY  +HNHP P
Sbjct:  165 KSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQK-CNVKKRVERSFQDPTVVITTYEGQHNHPIP 231          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQ--HHHQHNSKS 713
            D + WRKYGQK +KG+PYPR YY+C ++  C  RK VER++ DP  ++ TY  +HNH  P   TS  Q   ++QHN+ +
Sbjct:  416 DGYRWRKYGQKVVKGNPYPRSYYKC-TTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPNNQHNTST 493          

HSP 2 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 38/103 (36.89%), Postives = 52/103 (50.49%), Query Frame = 3
Query:  450 SRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP---------LPSTSRKQHHHQHNSKSRKPRRD 731
            S+ +    P  D + WRKYGQK +KGS +PR YY+C +   CP +K+VER S+D  +  I Y  +HNH  P           S+         NS   K +RD
Sbjct:  240 SQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKC-THPACPVKKKVER-SLDGQVTEIIYKGQHNHELPQKRGNNNGSCKSSDIANQFQTSNSSLNKSKRD 340          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHHQHNSKSR 716
            D + WRKYGQKP+K SP+PR YYRC+++  C  +K+VERS  DPS ++ TY  +H HP PL    ++     + S SR
Sbjct:  119 DGYKWRKYGQKPVKDSPFPRNYYRCTTT-WCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSSPSNGSASR 195          
The following BLAST results are available for this feature:
BLAST of EY720143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
WRKY1_ARATH5.572e-1660.66WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK71_ARATH5.572e-1644.55Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRK61_ARATH5.572e-1650.67Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK42_ARATH5.572e-1652.86Probable WRKY transcription factor 42 OS=Arabidops... [more]
WRK48_ARATH9.505e-1657.38Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK47_ARATH9.505e-1648.00Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRKY8_ARATH3.612e-1556.67Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRK28_ARATH4.717e-1552.94Probable WRKY transcription factor 28 OS=Arabidops... [more]
WRKY3_ARATH6.161e-1546.84Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRK68_ARATH6.161e-1547.44Probable WRKY transcription factor 68 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720143 ID=EY720143; Name=EY720143; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGCCCTGAAACCAATCTGTCAACATGAGTACTCCCACATTT
TTAAAGCACCCCCATTTTCCATTTCGTCTTCCGCTCATCATCAAACATTA
ATCTCCGCCACGTTCCCCTTTCTCTCTCTATCACTCTTTTTAATTATACA
CACACACATATATATATATATAATTTAGGATACATAGGACGTCGCCGGGC
GGCGATCAACGTTGAAGATAAGTATAGAGTAGAGGGGTTTCAGGTATGGA
CGGCAGGTTCAACAGCAACAGCAACCCATTTACTGGTGAGCAAGAAGAAA
ATGATACGACGCCGGAGAACAGCTCCGAATCCCCACCTTCTTCTTCCACT
TATAACGACATGATGAAGATGACCTCTACTTCTTCCCCTAAGAAAAGGCG
AGCTATGCAGAAGAGAGTAATATCAGTGCCAATCAAGGAGGTGGAGGGAT
CAAGACTGAAAGGGGAGAGCGCCCCACCCTCCGATTCCTGGGCTTGGCGA
AAATACGGCCAGAAACCCATCAAAGGCTCTCCTTATCCGAGAGGATATTA
CAGATGTAGCAGCTCGAAAGGCTGCCCGGNCAGAAAACAAGTGGAGCGAA
GCAGCGTGGACCCCAGCATGCTACTCATCACCTATTCTTGTGAACACAAC
CACCCTTGGCCTCTTCCTTCTACTTCTAGAAAACAACACCACCACCAACA
CAATTCTAAAAGCCGCAAGCCCCGACGCGACCCCGAGCCAGAGCCCGAAC
CCGAACCCGAGCCCGAGCCGGAACACGAAGAGAAGTTTACGGATCTTGCT
GATCATGGATACCCGCTCATGACGACCAGTGCGGATGTAATCCCGTGGTT
CGGGGAAATGGAACGACCACC
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