EY720143

Overview
NameEY720143
Unique NameEY720143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.047e-15
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTS 677
            R + ++   +D   WRKYGQK  KG+P PR YYRC+ + GCP RKQV+R + D S+L+ TY   H+H  PL +T+
Sbjct:  218 RARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLSATT 292          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  393 KRRAMQKRVISVP-IKEVEGSRLKGESAPP----SDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHHQHNSKSRKPRRD 731
            KRR M+  +   P +K +   R+  ++        D + WRKYGQK ++G+P PR YY+C ++ GCP RK VER+S DP  ++ TY  +H+H  P   TS+   +H+   + R    D
Sbjct:  347 KRRRMEGAMEITPLVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKC-TAHGCPVRKHVERASHDPKAVITTYEGKHDHDVP---TSKSSSNHEIQPRFRPDETD 460          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.058e-14
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTS 677
            D + WRKYGQK +KG+PYPR YY+C ++ GC  RK VER++ DP  ++ TY  +HNH  P   +S
Sbjct:  410 DGYRWRKYGQKVVKGNPYPRSYYKC-TTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSS 473          

HSP 2 Score: 72.0182 bits (175), Expect = 4.882e-12
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 3
Query:  408 QKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            Q+    V I E    +      P  D + WRKYGQK +KGS +PR YY+C ++ GCP +K+VER S+D  +  I Y  +HNH  P
Sbjct:  205 QRETSDVTIIEHRSQQPLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKC-TNPGCPVKKKVER-SLDGQVTEIIYKGQHNHEPP 287          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.216e-14
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQH 689
            D + WRKYGQK +KG+P+PR YYRC+S+ GCP RK +E +  +   ++ITY   HNH  P+P   +K+H
Sbjct:  332 DGYRWRKYGQKMVKGNPHPRNYYRCTSA-GCPVRKHIETAVENTKAVIITYKGVHNHDMPVP---KKRH 396          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.982e-13
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 3
Query:  372 TSTSSPKKRRAMQKRVISVPIKEVEGSRLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNH 653
            T+T+S   +   +K+     IK     + + E     D + WRKYG+K +K SP+PR YY+CS   GCP +K+VER   DPS ++ TY   HNH
Sbjct:   81 TATASADNQNKKEKK----KIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVD-GCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSR 680
            D + WRKYGQK  + +P PR Y+RCS S  C  +K+V+RS+ DPS L+ TY   HNH  P  S SR
Sbjct:  147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNHTGPHASVSR 212          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.588e-13
Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNH 653
            D + WRKYGQK +K SP+PR YYRC++S+ C  +K+VERSS DPS+++ TY  +H H
Sbjct:  148 DGYRWRKYGQKAVKNSPFPRSYYRCTNSR-CTVKKRVERSSDDPSIVITTYEGQHCH 203          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.381e-13
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP--LPSTSRKQHHHQHNSKSRKP 722
            D + WRKYGQK  + +P PR Y++C+ +  C  +K+V+RS  D S+L+ TY  EHNHP P  + S +    H  H   +  P
Sbjct:  147 DGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRHISHGGSASTP 228          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.415e-13
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 3
Query:  483 DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            D + WRKYGQK  + +P PR Y+RCS +  CP +K+V+RS+ DPS+L+ TY   HNH  P
Sbjct:  177 DGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNHLGP 236          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.767e-13
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 3
Query:  459 KGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPS 671
            K E     D + WRKYGQK +K SP+PR YYRC+++  C  +K+VERS  DPS ++ TY  +H H  PL S
Sbjct:  167 KSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTA-SCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTS 236          
The following BLAST results are available for this feature:
BLAST of EY720143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
WRK72_ARATH8.047e-1548.00Probable WRKY transcription factor 72 OS=Arabidops... [more]
WRK20_ARATH1.793e-1436.44Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRKY4_ARATH3.058e-1450.77Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRK32_ARATH5.216e-1449.28Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK50_ARATH1.982e-1340.43Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK60_ARATH2.588e-1351.52Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK57_ARATH2.588e-1356.14Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRK40_ARATH3.381e-1340.24Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRK18_ARATH4.415e-1351.67WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK23_ARATH5.767e-1349.30Probable WRKY transcription factor 23 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720143 ID=EY720143; Name=EY720143; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGCCCTGAAACCAATCTGTCAACATGAGTACTCCCACATTT
TTAAAGCACCCCCATTTTCCATTTCGTCTTCCGCTCATCATCAAACATTA
ATCTCCGCCACGTTCCCCTTTCTCTCTCTATCACTCTTTTTAATTATACA
CACACACATATATATATATATAATTTAGGATACATAGGACGTCGCCGGGC
GGCGATCAACGTTGAAGATAAGTATAGAGTAGAGGGGTTTCAGGTATGGA
CGGCAGGTTCAACAGCAACAGCAACCCATTTACTGGTGAGCAAGAAGAAA
ATGATACGACGCCGGAGAACAGCTCCGAATCCCCACCTTCTTCTTCCACT
TATAACGACATGATGAAGATGACCTCTACTTCTTCCCCTAAGAAAAGGCG
AGCTATGCAGAAGAGAGTAATATCAGTGCCAATCAAGGAGGTGGAGGGAT
CAAGACTGAAAGGGGAGAGCGCCCCACCCTCCGATTCCTGGGCTTGGCGA
AAATACGGCCAGAAACCCATCAAAGGCTCTCCTTATCCGAGAGGATATTA
CAGATGTAGCAGCTCGAAAGGCTGCCCGGNCAGAAAACAAGTGGAGCGAA
GCAGCGTGGACCCCAGCATGCTACTCATCACCTATTCTTGTGAACACAAC
CACCCTTGGCCTCTTCCTTCTACTTCTAGAAAACAACACCACCACCAACA
CAATTCTAAAAGCCGCAAGCCCCGACGCGACCCCGAGCCAGAGCCCGAAC
CCGAACCCGAGCCCGAGCCGGAACACGAAGAGAAGTTTACGGATCTTGCT
GATCATGGATACCCGCTCATGACGACCAGTGCGGATGTAATCCCGTGGTT
CGGGGAAATGGAACGACCACC
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