EY720143

Overview
NameEY720143
Unique NameEY720143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK75_ARATH (Probable WRKY transcription factor 75 OS=Arabidopsis thaliana GN=WRKY75 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 3
Query:  435 KEVEGSRLKGESAPPS-----------DSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHP 656
            K VE S+ KG+    +           D + WRKYGQK +K + +PR YYRC+   GC  +KQV+R +VD  +++ TY   H+HP
Sbjct:   41 KSVESSKKKGKKQRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYG-GCNVKKQVQRLTVDQEVVVTTYEGVHSHP 124          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.397e-11
Identity = 28/70 (40.00%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWP 662
            +++ +   P+D + WRKYGQK +KG+P PR Y++C++ + C  +K VER + +  +++ TY   HNHP P
Sbjct:  298 QMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIE-CRVKKHVERGADNIKLVVTTYDGIHNHPSP 366          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.049e-11
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 3
Query:  357 DMMKMTSTSSPKKRRAMQKRVISVPIKEVEGS---RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHPWPLPSTSRKQHHH 695
            D     +TSS +K R+ +K+      KE E     + + +     D + WRKYGQK +K +P+PR YY+C + +GC  +KQV+R   D  +++ TY   H H    PS +    HH
Sbjct:   27 DNSAQPTTSSEEKPRSKKKK------KEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKC-TEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPSDN---FHH 132          
BLAST of EY720143 vs. ExPASy Swiss-Prot
Match: WRK43_ARATH (Probable WRKY transcription factor 43 OS=Arabidopsis thaliana GN=WRKY43 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 3
Query:  453 RLKGESAPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPXRKQVERSSVDPSMLLITYSCEHNHP 656
            R K ++    D + WRKYGQK +K S YPR YYRC+    C  +KQV+R S + S++  TY   HNHP
Sbjct:   21 RTKSDADILDDGYRWRKYGQKSVKNSLYPRSYYRCTQHM-CNVKKQVQRLSKETSIVETTYEGIHNHP 87          
The following BLAST results are available for this feature:
BLAST of EY720143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
WRK75_ARATH4.133e-1140.00Probable WRKY transcription factor 75 OS=Arabidops... [more]
WRK10_ARATH5.397e-1140.00Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK45_ARATH7.049e-1134.48Probable WRKY transcription factor 45 OS=Arabidops... [more]
WRK43_ARATH9.206e-1147.06Probable WRKY transcription factor 43 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-F07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720143 ID=EY720143; Name=EY720143; organism=Citrus sinensis; type=EST; length=871bp
CCACGCGTCCGCCCTGAAACCAATCTGTCAACATGAGTACTCCCACATTT
TTAAAGCACCCCCATTTTCCATTTCGTCTTCCGCTCATCATCAAACATTA
ATCTCCGCCACGTTCCCCTTTCTCTCTCTATCACTCTTTTTAATTATACA
CACACACATATATATATATATAATTTAGGATACATAGGACGTCGCCGGGC
GGCGATCAACGTTGAAGATAAGTATAGAGTAGAGGGGTTTCAGGTATGGA
CGGCAGGTTCAACAGCAACAGCAACCCATTTACTGGTGAGCAAGAAGAAA
ATGATACGACGCCGGAGAACAGCTCCGAATCCCCACCTTCTTCTTCCACT
TATAACGACATGATGAAGATGACCTCTACTTCTTCCCCTAAGAAAAGGCG
AGCTATGCAGAAGAGAGTAATATCAGTGCCAATCAAGGAGGTGGAGGGAT
CAAGACTGAAAGGGGAGAGCGCCCCACCCTCCGATTCCTGGGCTTGGCGA
AAATACGGCCAGAAACCCATCAAAGGCTCTCCTTATCCGAGAGGATATTA
CAGATGTAGCAGCTCGAAAGGCTGCCCGGNCAGAAAACAAGTGGAGCGAA
GCAGCGTGGACCCCAGCATGCTACTCATCACCTATTCTTGTGAACACAAC
CACCCTTGGCCTCTTCCTTCTACTTCTAGAAAACAACACCACCACCAACA
CAATTCTAAAAGCCGCAAGCCCCGACGCGACCCCGAGCCAGAGCCCGAAC
CCGAACCCGAGCCCGAGCCGGAACACGAAGAGAAGTTTACGGATCTTGCT
GATCATGGATACCCGCTCATGACGACCAGTGCGGATGTAATCCCGTGGTT
CGGGGAAATGGAACGACCACC
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