EY720125

Overview
NameEY720125
Unique NameEY720125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720125 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 46/183 (25.14%), Postives = 86/183 (46.99%), Query Frame = 1
Query:   16 LIAKLQHRHLVRLFGCCVEQGENILIYEYMPNKSLDVFLFNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGT**VKLHS*K*CLLVLFS*ITQY*LKQWKFSGYMSPEYALEGLYSIKSDVXSFGVLMLXTLSSKK 564
            L++K+ H ++    G C   G  +++ E +P  +L+  L + K +  L    R+R+    A G+ +LH  + +  +HRD+K+SN+L+D +M  KI DFG++ +    ++  +     GT                               YM+PE  +   ++  SDV SFG+++   L+ K+
Sbjct:   72 LMSKIYHPNICLFMGACTIPGRCVIVTELVPKGNLETLLHDQKIQ--LPLYLRMRMARDAALGINWLHESNPV-FVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGT-----------------------------PLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKE 222          
BLAST of EY720125 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 61/252 (24.21%), Postives = 116/252 (46.03%), Query Frame = 1
Query:   16 LIAKLQHRHLVRLFGCCVEQGENILIYEYMPNKSLDVFLFNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKRIAGT**VKLHS*K*CLLVLFS*ITQY*LKQWKFSGYMSPEYALEGLYSIKSDVXSFGVLMLXTLSSKKNTGVYNSDSFNLLGYAWGLWKDDRAHELMDPVIKQDEV-SLAMLIRYINVALLCVQENAADRPIMSDVI 768
            +++K+ H ++V   G C + G+  ++ E +    L+  L N + K+      R+++ +  A G+ +LH  +R  I+H DLK +N+L+D ++  K++DFG ++I   +E Q   K   GT                               +M+PE  +   Y+ K+DV SFG++ L  + +K+    ++ D        + ++ +   +E   P I  D + SL  LI+       C   N  +RP  S+++
Sbjct:  325 IMSKIFHPNVVLFLGACTQSGKMQIVTE-LCQTDLEKLLHNDRTKKEFSLFRRMQMAKDAALGMNWLHGITR--IVHNDLKTANLLVDINLRVKVTDFGFSQIKEGEEFQ--DKAAKGT-----------------------------PLWMAPEVMMGNPYNEKADVYSFGII-LWEILTKEAPYSHHKD--------YDIFFNAICNEKERPPIPADTLPSLRHLIQ------TCWDHNPQNRPSFSEIL 527          
BLAST of EY720125 vs. ExPASy Swiss-Prot
Match: EPHA3_MOUSE (Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 1
Query:   16 LIAKLQHRHLVRLFGCCVEQGENILIYEYMPNKSLDVFLFNPKKKRLLGWQARVRIIEGIAQGLLYLHRYSRLRIIHRDLKASNILLDSDMNPKISDFGMARISGDDELQGNTKR 360
            ++ +  H +++RL G   +    +++ EYM N SLD FL   K          V ++ GIA G+ YL   S +  +HRDL A NIL++S++  K+SDFG++R+  DD     T R
Sbjct:  673 IMGQFDHPNIIRLEGVVTKSKPEMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 782          
The following BLAST results are available for this feature:
BLAST of EY720125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
SHKC_DICDI5.678e-1125.14Dual specificity protein kinase shkC OS=Dictyostel... [more]
SHKD_DICDI7.416e-1124.21Dual specificity protein kinase shkD OS=Dictyostel... [more]
EPHA3_MOUSE9.685e-1135.65Ephrin type-A receptor 3 OS=Mus musculus GN=Epha3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-D07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720125 ID=EY720125; Name=EY720125; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGGATGCTTATAGCAAAACTCCAACACAGACACCTTGTCAG
ACTCTTCGGTTGCTGTGTAGAACAAGGCGAAAACATTTTAATCTATGAGT
ACATGCCTAACAAAAGCTTGGATGTTTTCCTTTTCAATCCAAAGAAAAAG
CGCCTGCTAGGTTGGCAAGCACGTGTTAGAATTATTGAAGGAATTGCCCA
AGGACTATTATATCTTCATCGGTATTCTAGACTGAGAATTATTCACAGAG
ATCTTAAGGCAAGTAATATTCTCTTAGATAGTGACATGAACCCCAAAATA
TCAGATTTTGGCATGGCAAGAATATCTGGTGATGATGAGTTGCAGGGAAA
TACTAAACGGATTGCTGGAACTTAGTAAGTAAAACTCCATTCCTGAAAAT
GATGTTTGCTTGTCCTGTTTTCTTAGATCACTCAATATTAATTGAAACAA
TGGAAATTTAGTGGTTACATGTCACCTGAGTATGCCCTAGAAGGCCTGTA
CTCCATTAAATCAGATGTGTNTAGCTTTGGAGTATTAATGTTGGANACAT
TGAGTAGCAAGAAGAACACTGGCGTCTACAATAGTGATTCCTTTAACCTT
CTTGGATATGCTTGGGGTCTATGGAAAGATGACAGAGCTCATGAATTGAT
GGATCCAGTAATAAAGCAAGATGAAGTATCATTGGCCATGCTGATTAGAT
ACATAAACGTGGCTCTTCTCTGCGTTCAAGAGAATGCAGCTGATAGACCA
ATCATGTCGGATGTCATCTCGAATGATGAAAATGAGCATCTTAATTTACT
TCTCCCAAGGAACCTGCTTTACAACAGGTAAAACGTGAATAATTCACGGC
CCATTGTGGTCGTGAATTATGTACCGGTCCTGAATCCACCTCGAT
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