EY720120

Overview
NameEY720120
Unique NameEY720120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720120 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.582e-24
Identity = 55/94 (58.51%), Postives = 64/94 (68.09%), Query Frame = 3
Query:   66 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFGEDYPSKPPKGRF-PARILPAVGLSSWKCVSI 344
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK GT WEGG F L + F +DYPS PPK +F P    P V  S   C+SI
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96          
BLAST of EY720120 vs. ExPASy Swiss-Prot
Match: UBC9_PAGMA (SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ube2i PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 53/94 (56.38%), Postives = 62/94 (65.96%), Query Frame = 3
Query:   66 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFGEDYPSKPPKGRF-PARILPAVGLSSWKCVSI 344
            GIA  RLA+ERK+WRK+HP G VA P   PDG++NLM   C IPGK GT WEGG F L + F +DYPS PPK +F P    P V  S   C+SI
Sbjct:    3 GIALSRLAQERKAWRKDHPLGLVAVPTKNPDGTMNLMNGECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSI 96          
BLAST of EY720120 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 3
Query:   66 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFGEDYPSKPPKGRF-PARILPAVGLSSWKCVSI 344
            GIA GRLAEERK WRK+HP GF+AKP    DG++NL  W C IPG+  T WEGG + + + F +D+PS PPK +F P    P V  S   C+S+
Sbjct:    3 GIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96          
BLAST of EY720120 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.953e-21
Identity = 48/89 (53.93%), Postives = 59/89 (66.29%), Query Frame = 3
Query:   81 RLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFGEDYPSKPPKGRFPARIL-PAVGLSSWKCVSI 344
            RL EERK WRK+HP GF AKP    DGS++L  W   IPGK GT+W GG +P+T+ +  +YPSKPPK +FPA    P V  S   C+SI
Sbjct:    8 RLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSI 96          
BLAST of EY720120 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.266e-19
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   69 IARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFGEDYPSKPPKGRF-PARILPAVGLSSWKCVSI 344
            + + RL EERK WR++HP GF AKP    DG ++LM W   IPGK  T WEGG + LT+ F E+YP++PPK RF P    P V  S   C+SI
Sbjct:    4 LCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSI 96          
The following BLAST results are available for this feature:
BLAST of EY720120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
UBC9A_DANRE2.582e-2458.51SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]
UBC9_PAGMA5.384e-2256.38SUMO-conjugating enzyme UBC9 OS=Pagrus major GN=ub... [more]
UBC9_CAEEL1.567e-2152.13SUMO-conjugating enzyme UBC9 OS=Caenorhabditis ele... [more]
UBC9_YEAST5.953e-2153.93SUMO-conjugating enzyme UBC9 OS=Saccharomyces cere... [more]
UBC9_SCHPO3.266e-1950.54SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-C11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720120 ID=EY720120; Name=EY720120; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGATTATTTAGTGTTTTTGAGAGCGAGTAAAAGAAAAGGAA
AGAGCGATGTCGGGAGGCATAGCACGTGGTCGGCTGGCTGAGGAGCGAAA
GTCGTGGCGTAAAAATCATCCTCATGGTTTCGTGGCAAAGCCTGAGACGT
TGCCGGACGGTTCGGTGAATCTGATGGTGTGGCATTGCACTATTCCCGGA
AAAGCCGGAACTGATTGGGAGGGTGGTTTCTTCCCACTCACTCTCCACTT
CGGCGAAGATTACCCTAGCAAGCCACCAAAGGGCAGGTTTCCGGCAAGGA
TTTTGCCAGCCGTAGGTCTATCCAGCTGGAAGTGTGTGTCTATCAGGCCG
CGGAGAGGACCGTGGGTGGAGAGCGGGCGTCGGGGTGAAGGCGGGTCTGG
GGGGGTGTCCGGGAGTTGGTGGAGCGGGGGGAGCGTGGGGATCCGGGGGG
GGGGGAGGGTTGTGGTGTCGGGGGGCGGGAGGGGGGGGAGGTGGGGAGAG
GAGGTGGGGGGGGGGGGGGGGGGGGGGCTGGGGGCGGGGGGGAGGTGTGT
CGGGGGGGAGGATCGTCGTGGGGTCGGGGTCGGGGGGGGGGGGGGGCGAG
GGGAGGGGGGGGCGGGGGTGGGGGGGGGTGGTGGGTGGGGTGGGGGTGTG
TGAGGGGAAGAGCGAGATGTGACGGAGGTGAAGATCGGGAGATGAGTCGG
GGGTGGGTGGGGGGGGGGGAGTGGGGGGTGTCTCAGACTCGCAACCCCCG
CGACCTATCAACGACAGAGGAGGCCGCGGCGGGGGCGCGGGTGGGGCGGG
CGCGCGGCGCGGGTGGGCGGGCCGGGGGGCGGAGTCTCCACGCTATCTCG
CTCTGGTGGATGTAAGTTTGAAGGGNGAGGGACGGTA
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