EY720111

Overview
NameEY720111
Unique NameEY720111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B2_BOMMO (Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDMK++E  VR+++MEGLLWGA KL PVGYGI KLQIM  I DD VSVD L E+    +   ++VQ+ D+    +I
Sbjct:  139 ILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFEDFVQSVDIAAFNKI 222          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_XENTR (Elongation factor 1-beta OS=Xenopus tropicalis GN=eef1b PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.548e-21
Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+QMEGL+WGA KL PVGYGIKKLQI   + DD V  D L EE++      ++VQ+ D+    +I
Sbjct:  145 ILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTDVL-EENI--TAFEDFVQSMDVAAFNKI 228          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_XENLA (Elongation factor 1-delta OS=Xenopus laevis GN=eef1d PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 52/87 (59.77%), Postives = 62/87 (71.26%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VR+VQM+GL+WG+ KL PVGYGIKKLQI   + DD V  D L EE    E   +YVQ+ D+    +I
Sbjct:  182 ILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFE---DYVQSVDIAAFNKI 265          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_DROME (Probable elongation factor 1-beta OS=Drosophila melanogaster GN=Ef1beta PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            VLLDVKPWDDETDMK++E  VR+++M+GLLWGA KL PVGYGI KLQIM  I DD VS+D L E+    E   ++VQ+ D+    +I
Sbjct:  139 VLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEK---IEEFEDFVQSVDIAAFNKI 222          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_BOVIN (Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+ KL PVGYGIKKLQI   + DD V  D ++EE +     +EYVQ+ D+    +I
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD-MLEEQI--TAFDEYVQSMDVAAFNKI 225          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_XENLA (Elongation factor 1-beta OS=Xenopus laevis GN=eef1b PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.761e-20
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE +RS+QM+GLLWG+ KL PVGYGIKKLQI   + DD V  D L E+    E   ++VQ+ D+    +I
Sbjct:  144 ILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDVLEEKITAFE---DFVQSMDVAAFNKI 227          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_MOUSE (Elongation factor 1-beta OS=Mus musculus GN=Eef1b PE=1 SV=5)

HSP 1 Score: 99.7525 bits (247), Expect = 2.300e-20
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+ KL PVGYGIKKLQI   + DD V  D L E+    E   +YVQ+ D+    +I
Sbjct:  142 ILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_HUMAN (Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 2.300e-20
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+ KL PVGYGIKKLQI   + DD V  D L E+    E   +YVQ+ D+    +I
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_CHICK (Elongation factor 1-beta OS=Gallus gallus GN=EEF1B PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 2.300e-20
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+ KL PVGYGIKKLQI   + DD V  D L E+    E   +YVQ+ D+    +I
Sbjct:  142 ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_RABIT (Elongation factor 1-beta OS=Oryctolagus cuniculus GN=EEF1B PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.004e-20
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM KLEE VRS+Q +GL+WG+ KL PVGYGIKKLQI   + DD V  D L E+    E   +YVQ+ D+    +I
Sbjct:  142 ILLDVKPWDDETDMVKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFE---DYVQSMDVAAFNKI 225          
The following BLAST results are available for this feature:
BLAST of EY720111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
EF1B2_BOMMO2.080e-2158.62Elongation factor 1-beta' OS=Bombyx mori PE=1 SV=2[more]
EF1B_XENTR3.548e-2159.77Elongation factor 1-beta OS=Xenopus tropicalis GN=... [more]
EF1D_XENLA4.634e-2159.77Elongation factor 1-delta OS=Xenopus laevis GN=eef... [more]
EF1B_DROME4.634e-2158.62Probable elongation factor 1-beta OS=Drosophila me... [more]
EF1B_BOVIN1.348e-2057.47Elongation factor 1-beta OS=Bos taurus GN=EEF1B PE... [more]
EF1B_XENLA1.761e-2057.47Elongation factor 1-beta OS=Xenopus laevis GN=eef1... [more]
EF1B_MOUSE2.300e-2057.47Elongation factor 1-beta OS=Mus musculus GN=Eef1b ... [more]
EF1B_HUMAN2.300e-2057.47Elongation factor 1-beta OS=Homo sapiens GN=EEF1B2... [more]
EF1B_CHICK2.300e-2057.47Elongation factor 1-beta OS=Gallus gallus GN=EEF1B... [more]
EF1B_RABIT3.004e-2057.47Elongation factor 1-beta OS=Oryctolagus cuniculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720111 ID=EY720111; Name=EY720111; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGAGCATATTGATGCACTTTTAAGGATCTCTGGCGTTACTG
GTGAAGGCTCTGGTGTCACTGTAGAGGGATCTGCTCCTGTTGCTACTCCC
CCGGTAGCTGACTCAAAGGCAGCAGCTCCTGATGATGACGACGATGATGT
GGATCTATTTGGTGAGGAGACAGAAGAGGAAAAGAAGGCTGCCGAGGCAC
GCGCAGCTTCCGTCAAAGCATCAGCCAAAAAGAAAGAATCTGGCAAGTCA
TCAGTTCTATTGGATGTGAAGCCTTGGGATGATGAGACTGACATGAAGAA
GCTTGAGGAAGCAGTAAGAAGTGTTCAGATGGAAGGATTACTCTGGGGAG
CCANCAAACTTGCACCTGTTGGATATGGTATCAAGAAATTGCAAATAATG
CTTACAATTGTGGATGACTTGGTGTCTGTTGACACCCTCATTGAGGAACA
CCTGCTGGAAGAACCANTGAATGAATATGTCCAGAACTGTGATATGGTAN
CCGGCAANCGAATATGAGNTGGGGGATCCGGGGNCAANTGGGTGCGAAAN
AGGCGTCCNGGGGTGTTGGCTTGGGTANGGGAGAGANCNAAGTGGTGTGT
GTTTTGAAATGTTTGATTTTGTTTCANGGGTGTTGTGTGTGGCCCTNATG
GATTCGTCCTTCTGTGGATGCTCTCTCTCTGGAATTTGCTTACTGTGACT
GGAGTGGATATGCCTCTCTGGCATGCGCAACCTTTAGAAGCTTCATGATT
GGCAGGTGGCTTTGCCCATTTGAAGTGTTGTGAAAAGAAAAAAAAAAGGG
GGGGCGGCTCTACAGGAGCACCCTTACGTCTGGCGGGCGGGGAACATCAT
ACCCACCTGTGGGTGCCCTAAATTCATTCCCCGGCGCGCCCTTTACA
back to top