EY720111

Overview
NameEY720111
Unique NameEY720111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_RABIT (Elongation factor 1-delta OS=Oryctolagus cuniculus GN=EEF1D PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.740e-20
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRSVQ++GL+WGA KL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQ+ D+    +I
Sbjct:  197 ILLDVKPWDDETDMARLEACVRSVQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 280          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_RAT (Elongation factor 1-delta OS=Rattus norvegicus GN=Eef1d PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGA KL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQ+ D+    +I
Sbjct:  198 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_MOUSE (Elongation factor 1-delta OS=Mus musculus GN=Eef1d PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGA KL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQ+ D+    +I
Sbjct:  198 ILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFDKI 281          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_MACFA (Elongation factor 1-delta OS=Macaca fascicularis GN=EEF1D PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGA KL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQ+ D+    +I
Sbjct:  198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_HUMAN (Elongation factor 1-delta OS=Homo sapiens GN=EEF1D PE=1 SV=5)

HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRS+Q++GL+WGA KL PVGYGI+KLQI   + DD V  D L+EE + +    E+VQ+ D+    +I
Sbjct:  198 ILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTD-LLEEEITK--FEEHVQSVDIAAFNKI 281          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_ARTSA (Elongation factor 1-delta OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.947e-19
Identity = 46/87 (52.87%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLD+KPWDDETDM  +E  VRS+ M+GL+WGA KL PV +G+KKLQI   + DD VSVD L+E+    E   +YVQ+ D+    +I
Sbjct:  154 ILLDIKPWDDETDMGAMEREVRSIAMDGLIWGASKLVPVAFGVKKLQISCVVEDDKVSVDELVEK---IEAFEDYVQSVDIAAFNKI 237          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1D_BOVIN (Elongation factor 1-delta OS=Bos taurus GN=EEF1D PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.543e-19
Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            +LLDVKPWDDETDM +LE  VRSVQ++GL+WG+ KL PVGYGI+KLQI   + DD V  D L EE    E   E+VQ+ D+    +I
Sbjct:  197 ILLDVKPWDDETDMAQLEACVRSVQLDGLVWGSSKLVPVGYGIRKLQIQCVVEDDKVGTDQLEEEITKFE---EHVQSVDIAAFNKI 280          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B2_CAEEL (Probable elongation factor 1-beta/1-delta 2 OS=Caenorhabditis elegans GN=Y41E3.10 PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 3.321e-19
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            V+LDVKPWDDETD+ ++E+ VRS++M+GL+WG  KL P+GYGIKKLQI+  I D  VSVD LIE+  +     ++VQ+ D+V   +I
Sbjct:  179 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEK--ITGDFEDHVQSVDIVAFNKI 263          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B1_CAEEL (Probable elongation factor 1-beta/1-delta 1 OS=Caenorhabditis elegans GN=F54H12.6 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.321e-19
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDMVXGXRI 514
            V+LDVKPWDDETD+ ++E+ VRS++M+GL+WG  KL P+GYGIKKLQI+  I D  VSVD LIE+  +     ++VQ+ D+V   +I
Sbjct:  129 VILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEK--ITGDFEDHVQSVDIVAFNKI 213          
BLAST of EY720111 vs. ExPASy Swiss-Prot
Match: EF1B_ARTSA (Elongation factor 1-beta OS=Artemia salina PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 7.399e-19
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 2
Query:  254 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGAXKLAPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLLEEPXNEYVQNCDM 496
            V+LD+KPWDDETDM ++E+ VRSVQM+GL+WGA KL P+ YGIKKL IM  + DD VS+D L +E + E    ++VQ+ D+
Sbjct:  124 VILDIKPWDDETDMAEMEKLVRSVQMDGLVWGAAKLIPLAYGIKKLSIMCVVEDDKVSIDEL-QEKISE--FEDFVQSVDI 201          
The following BLAST results are available for this feature:
BLAST of EY720111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
EF1D_RABIT8.740e-2056.32Elongation factor 1-delta OS=Oryctolagus cuniculus... [more]
EF1D_RAT1.491e-1955.17Elongation factor 1-delta OS=Rattus norvegicus GN=... [more]
EF1D_MOUSE1.491e-1955.17Elongation factor 1-delta OS=Mus musculus GN=Eef1d... [more]
EF1D_MACFA1.491e-1955.17Elongation factor 1-delta OS=Macaca fascicularis G... [more]
EF1D_HUMAN1.491e-1955.17Elongation factor 1-delta OS=Homo sapiens GN=EEF1D... [more]
EF1D_ARTSA1.947e-1952.87Elongation factor 1-delta OS=Artemia salina PE=1 S... [more]
EF1D_BOVIN2.543e-1956.32Elongation factor 1-delta OS=Bos taurus GN=EEF1D P... [more]
EF1B2_CAEEL3.321e-1954.02Probable elongation factor 1-beta/1-delta 2 OS=Cae... [more]
EF1B1_CAEEL3.321e-1954.02Probable elongation factor 1-beta/1-delta 1 OS=Cae... [more]
EF1B_ARTSA7.399e-1956.79Elongation factor 1-beta OS=Artemia salina PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720111 ID=EY720111; Name=EY720111; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGAGCATATTGATGCACTTTTAAGGATCTCTGGCGTTACTG
GTGAAGGCTCTGGTGTCACTGTAGAGGGATCTGCTCCTGTTGCTACTCCC
CCGGTAGCTGACTCAAAGGCAGCAGCTCCTGATGATGACGACGATGATGT
GGATCTATTTGGTGAGGAGACAGAAGAGGAAAAGAAGGCTGCCGAGGCAC
GCGCAGCTTCCGTCAAAGCATCAGCCAAAAAGAAAGAATCTGGCAAGTCA
TCAGTTCTATTGGATGTGAAGCCTTGGGATGATGAGACTGACATGAAGAA
GCTTGAGGAAGCAGTAAGAAGTGTTCAGATGGAAGGATTACTCTGGGGAG
CCANCAAACTTGCACCTGTTGGATATGGTATCAAGAAATTGCAAATAATG
CTTACAATTGTGGATGACTTGGTGTCTGTTGACACCCTCATTGAGGAACA
CCTGCTGGAAGAACCANTGAATGAATATGTCCAGAACTGTGATATGGTAN
CCGGCAANCGAATATGAGNTGGGGGATCCGGGGNCAANTGGGTGCGAAAN
AGGCGTCCNGGGGTGTTGGCTTGGGTANGGGAGAGANCNAAGTGGTGTGT
GTTTTGAAATGTTTGATTTTGTTTCANGGGTGTTGTGTGTGGCCCTNATG
GATTCGTCCTTCTGTGGATGCTCTCTCTCTGGAATTTGCTTACTGTGACT
GGAGTGGATATGCCTCTCTGGCATGCGCAACCTTTAGAAGCTTCATGATT
GGCAGGTGGCTTTGCCCATTTGAAGTGTTGTGAAAAGAAAAAAAAAAGGG
GGGGCGGCTCTACAGGAGCACCCTTACGTCTGGCGGGCGGGGAACATCAT
ACCCACCTGTGGGTGCCCTAAATTCATTCCCCGGCGCGCCCTTTACA
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