EY720090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MSBA_HAES1 (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus somnus (strain 129Pt) GN=msbA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 594 GSIQFDNVHFSYL-TERKILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 G ++F+NV FSY E L+ +SF +P GK+VA+VG SGSGKSTI L+ R +D G I +DG +I + TL + + VV Q Sbjct: 340 GEVRFENVTFSYSGKEHPALNNISFTIPQGKTVALVGRSGSGKSTIANLVTRFYDVEQGKITLDGVNIQDYTLANLREHCAVVSQ 424
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MSBA_BURPS (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia pseudomallei GN=msbA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 522 MFQLLEEKADIQDRDNAMPLNLKGGSIQFDNVHFSYLTER---KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 +F L++E + + PL G+I+F +V FSY R + LD VSF V G+ VA+ G SGSGK+T++ LL R FD SGS+R+DG + E +L I +V Q Sbjct: 329 IFGLIDEPREPEG--GGKPLARASGAIEFSHVSFSYGMSRDGRQTLDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGSVRVDGVALPEYSLRDLRNQIAMVSQ 437
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MSBA_BURP1 (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia pseudomallei (strain 1710b) GN=msbA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 522 MFQLLEEKADIQDRDNAMPLNLKGGSIQFDNVHFSYLTER---KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 +F L++E + + PL G+I+F +V FSY R + LD VSF V G+ VA+ G SGSGK+T++ LL R FD SGS+R+DG + E +L I +V Q Sbjct: 329 IFGLIDEPREPEG--GGKPLARASGAIEFSHVSFSYGMSRDGRQTLDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGSVRVDGVALPEYSLRDLRNQIAMVSQ 437
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MSBA_BURMA (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia mallei GN=msbA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 3 Query: 522 MFQLLEEKADIQDRDNAMPLNLKGGSIQFDNVHFSYLTER---KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 +F L++E + + PL G+I+F +V FSY R + LD VSF V G+ VA+ G SGSGK+T++ LL R FD SGS+R+DG + E +L I +V Q Sbjct: 329 IFGLIDEPREPEG--GGKPLARASGAIEFSHVSFSYGMSRDGRQTLDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGSVRVDGVALPEYSLRDLRNQIAMVSQ 437
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 477 SVYRETVQSLVDMKSMFQLLEEKADIQDRDNAMPLNLKG--GSIQFDNVHFSYLT--ERKILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 S Y E ++ L +++LLE + + + + LN K G+++F NVHF+Y E I S +P+G A+VG SGSGKST+L LL R +D SG+I +DG DI ++ IG V Q Sbjct: 450 SFYSELMKGLGAGGRLWELLEREPKLPFNEGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQ 575
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13 Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 519 SMFQLLEEKADIQDR--DNAMPLNLKGGSIQFDNVHFSYLTERKIL--DGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 S+F +L+ +I+ D +P N+KG I+F NV F+Y T ++ S + GKS AIVG SGSGKSTI+ L+ R +D G ++IDG+DI L S + IG+V Q Sbjct: 989 SVFAVLDRYTNIEPEKPDGFVPQNIKG-QIKFVNVDFAYPTRPDVIIFKNFSIDIDEGKSTAIVGPSGSGKSTIIGLIERFYDPLKGIVKIDGRDIRSYHLRSLRQHIGLVSQ 1100 HSP 2 Score: 68.5514 bits (166), Expect = 5.741e-11 Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 3 Query: 498 QSLVDMKSMFQLLEEKADIQDRDNAMPLNLKG--GSIQFDNVHFSYLT--ERKILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 +++V + + ++++ DI D DN L+ G +QF +V F Y + E I D + +P+GKSVA+VG SGSGKST++ LL R +D G I IDG I ++ ++ +G+V Q Sbjct: 344 EAVVAGERIIEVIKRVPDI-DSDNPRGQVLENIKGEVQFKHVKFMYSSRPETPIFDDLCLRIPSGKSVALVGGSGSGKSTVISLLQRFYDPIVGEILIDGVSIKKLQVKWLRSQMGLVSQ 462
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MSBA_METCA (Lipid A export ATP-binding/permease protein msbA OS=Methylococcus capsulatus GN=msbA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 555 QDRDNA-MPLNLKGGSIQFDNVHFSYLTER-KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 ++RD + L GSI++ +V Y +D VS V+PAGK+VA+VG SGSGK++++RLL R ++ +G I IDG DI E+TLES + I V Q Sbjct: 331 RERDRGRISLKRARGSIEYRHVSLVYDDRHGAAVDDVSLVIPAGKTVALVGQSGSGKTSLVRLLPRLYEATAGEILIDGHDIRELTLESLRRQIAYVGQ 429
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MDR3_HUMAN (Multidrug resistance protein 3 OS=Homo sapiens GN=ABCB4 PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 594 GSIQFDNVHFSYLTER--KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 G+++F++VHFSY + KIL G++ V +G++VA+VG+SG GKST ++L+ R +D G+I IDGQDI + + IGVV Q Sbjct: 392 GNLEFNDVHFSYPSRANVKILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLREIIGVVSQ 477
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 3 Query: 594 GSIQFDNVHFSYLTER--KILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 G+++F NVHFSY + KIL G++ V +G++VA+VG SG GKST ++LL R +D G + IDGQDI + + + IGVV Q Sbjct: 389 GNLEFKNVHFSYPSRSGIKILKGLNLKVQSGQTVALVGKSGCGKSTTVQLLQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQ 474
BLAST of EY720090 vs. ExPASy Swiss-Prot
Match: EXP8_STRPN (Putative ABC transporter ATP-binding protein exp8 OS=Streptococcus pneumoniae GN=exp8 PE=3 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13 Identity = 41/115 (35.65%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 501 SLVDMKSMFQLLEEKADIQDRDNAMPLNLKGGSIQFDNVHFSYLTERKILDGVSFVVPAGKSVAIVGTSGSGKSTILRLLFRSFDTHSGSIRIDGQDICEVTLESFTKSIGVVPQ 845 ++V +F L++E+ ++N ++ G+I+F++V FSY + ILD +SF V G+++A VG +GSGKS+I+ +L R ++ SG + +D DI + + E K+IG+V Q Sbjct: 309 AMVSAGRVFALIDERTYEPLQENGQA-KVQEGNIRFEHVCFSYDGKHPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQ 422 The following BLAST results are available for this feature:
BLAST of EY720090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720090 ID=EY720090; Name=EY720090; organism=Citrus sinensis; type=EST; length=903bpback to top |