EY720059

Overview
NameEY720059
Unique NameEY720059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAES (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 31/82 (37.80%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+S+F + +    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+G+
Sbjct:    3 IVKVTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGE 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAEQ (Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 31/82 (37.80%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+S+F + +    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+G+
Sbjct:    3 IVKVTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGE 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAW (Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAU (Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAS (Thioredoxin OS=Staphylococcus aureus (strain MSSA476) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAR (Thioredoxin OS=Staphylococcus aureus (strain MRSA252) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAN (Thioredoxin OS=Staphylococcus aureus (strain N315) GN=trxA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAM (Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAC (Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
[Close]
BLAST of EY720059 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.058e-12
Identity = 32/82 (39.02%), Postives = 55/82 (67.07%), Query Frame = 2 
Query:  329 ITEITESEFPNTVLKSERPVLVEFVAN*CGPCRLVAPAVEWLAQEYGDRLTVVKIDHDANPQLIEEYKIYGMPTLILFKNGQ 574
            I ++T+++F + V    +  LV+F A  CGPC+++AP +E LA +Y  +  ++K+D D NP    +Y++  +PTLI+FK+GQ
Sbjct:    3 IVKVTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQ 82
The following BLAST results are available for this feature:
BLAST of EY720059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
THIO_STAES9.058e-1237.80Thioredoxin OS=Staphylococcus epidermidis (strain ... [more]
THIO_STAEQ9.058e-1237.80Thioredoxin OS=Staphylococcus epidermidis (strain ... [more]
THIO_STAAW9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain MW2) ... [more]
THIO_STAAU9.058e-1239.02Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 ... [more]
THIO_STAAS9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain MSSA4... [more]
THIO_STAAR9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain MRSA2... [more]
THIO_STAAN9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain N315)... [more]
THIO_STAAM9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain Mu50 ... [more]
THIO_STAAC9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain COL) ... [more]
THIO_STAAB9.058e-1239.02Thioredoxin OS=Staphylococcus aureus (strain bovin... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-E02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720059 ID=EY720059; Name=EY720059; organism=Citrus sinensis; type=EST; length=919bp
CCACGCGTCCGCTCCGTTTTTGTATCACACAAAACTGAAAACAATTCAAA
AAGAAAAGAAAATGCTCTAAAAATCTTTAATCACTTGCAAAATGGATATC
GTCTTCTCCAACTCCACTTTATTGTTCAGACAACAACCACTGGTTGCTCC
TGTTCGTACAGTTACTGGGACCCACAGGCAACAGAACATCATCACCAGCG
CTACAACAACAACAACGTCGTCAAAGAATCAGCTATTGTTCGGGTCTCGA
ACGAACCTCTCACTAAAGTCTTATAATAATTCGCTTCCCAAGTTGGCAAT
ACGCGTACGCTGCGGTGCTAGCAGTGGCATAACGGAGATTACCGAAAGTG
AGTTCCCAAACACGGTCTTGAAATCTGAGCGTCCGGTTCTTGTCGAGTTC
GTGGCCAATTGATGCGGTCCTTGCCGCTTGGTTGCTCCCGCCGTCGAATG
GCTCGCCCAGGAATACGGAGACAGATTGACTGTCGTAAAGATTGATCATG
ACGCAAACCCACAACTAATAGAGGAATACAAAATTTATGGAATGCCGACC
TTGATTCTCTTCAAAAATGGGCAAGAAACTTCCGGAAAGCAGGAGGGAAG
GGGCAATTACTAACTCGAACCTTAAAAGTATATTGATACCCTTTTAAAAT
CCAACCCAATTGGCTTAACCCACTTTTAAACTGCTCCCCAAATATAGCTC
TTTTTTCAACACAATTTTGACCTTATTGGCAAAAAACAAAATGGGTAAAT
ATTTACTTTTTCCTTAGTGAAATTTGAATCCTTCCTTACCAAAACCCTGG
AAGGAATTCATTGAATAAATTTGAATTTTGTGACCCAAAACTCATCACCA
ACTTCTCTGACTCCCACCCCCACACGGGTTTTCATTCCTTTTCCTCAAAA
AAAACAAAAGGGGAGCGTT
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