EY720044

Overview
NameEY720044
Unique NameEY720044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720044 vs. ExPASy Swiss-Prot
Match: CRR12_ARATH (Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13
Identity = 61/214 (28.50%), Postives = 96/214 (44.86%), Query Frame = 3 
Query:   90 ISFQSSFTAAADPTYAYHVCSAN-FTGNSTYQTNRNLLLSSLPTNASRGNGYSSGFYNETTGQDPNKVYGLFLCRGDQTASS--CQDCVTFATRDLVQRCPDGKQTIIWYDQCLLRYSNRSIFSTMDTVPYVSLLNTQ---NVTDRGRFNQILASLMSQVVNQAVNNSRKFATRTANFTALQTLYSLAQCTPDLSSSDCNVCLQAAIAELPNCC 713
            +S   +F++AA  T+ Y  CS   +   S Y++N N LL+S  ++AS    Y++   N  +G D + VYGL+ CRGD ++ S  C  CV  A   L   C       +  + C ++Y N +     D    V         N  +  R + ++ SL       A ++   +    +       L  +AQCT DLS+++C  CL  AI  L   C
Sbjct:   13 VSLLGTFSSAAVDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYT-YNNFTTNGISG-DSSSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSL-------AASSGGSYRVGVSG-----ELQGVAQCTGDLSATECQDCLMEAIGRLRTDC 212
The following BLAST results are available for this feature:
BLAST of EY720044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
CRR12_ARATH5.700e-1328.50Cysteine-rich repeat secretory protein 12 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-C06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720044 ID=EY720044; Name=EY720044; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGGTACGCAACAAAATGCTGGGAATTCAAATGCCTCCCTCG
AAATTCTTCATGCTGTTTCTGTTTGTGATCTATCTTTCAATAAGCTTCCA
ATCCAGTTTTACAGCTGCAGCTGACCCAACATACGCTTATCATGTATGCT
CAGCAAATTTCACCGGAAACAGCACCTATCAAACTAACCGCAATCTTCTG
CTATCTTCGCTTCCCACAAACGCCAGCCGAGGCAATGGATACTCCAGCGG
TTTCTACAACGAAACCACCGGTCAAGACCCTAACAAGGTCTATGGCCTCT
TTCTCTGCCGCGGGGATCAAACTGCCAGCAGCTGCCAAGACTGTGTCACT
TTTGCCACCAGAGATTTAGTTCAGCGTTGCCCAGATGGCAAACAAACCAT
AATATGGTACGATCAGTGCCTTTTGCGTTATTCAAATCGGTCTATCTTTT
CAACCATGGACACAGTGCCCTATGTCTCTTTGTTGAATACACAAAATGTT
ACGGACCGAGGCAGATTTAACCAGATTTTGGCGTCTTTGATGAGCCAAGT
TGTAAATCAGGCTGTGAATAATTCCAGAAAGTTCGCGACACGAACGGCAA
ATTTCACAGCCTTACAAACACTTTACAGTCTCGCACAGTGTACCCCTGAC
CTGTCAAGTTCTGACTGTAACGTATGTCTTCAAGCAGCTATTGCAGAGTT
GCCGAATTGCTGTNAGCGAAAACAGGAGCACAGTCTTGATTCCGAGTGTA
TTGTCCGTATGAATTTACCCGTTTACAATTATCAGCACATCGCACCGNNN
CACTGCTCGGTCTTCTTCTCCTCACCCCTGNNTCGCTCGAGGAAAAGCGA
TCTCTCATCACAAT
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