EY720036

Overview
NameEY720036
Unique NameEY720036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720036 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.585e-11
Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = 3 
Query:  288 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMITIH 740
            E  V++ + +      +   D D    GAG +GL+ A  L++N  ++  ++E+ +S GGG W GG  F  +VV KPA   L E GI  DE     VI    LFT+    + +KL         K+   +  EDLI+K  +V GVV     +    +H
Sbjct:    9 EVAVTKSILKSTFDMWMDLIDVDVVIVGAGPSGLTAAKYLAQN-GVKTVVLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDE-----VIGEPELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKVSGVVIQSYSIEKAGLH 159
[Close]
BLAST of EY720036 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 48/157 (30.57%), Postives = 74/157 (47.13%), Query Frame = 3 
Query:  288 ESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTS---TIMSKL---LARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMITIH 740
            E  V++ + +      +   D D    GAG +GL+ A  L++N  ++  ++E+ +S GGG W GG  F  +VV KPA   L E GI  DE D         LFT+    + +KL         K+   +  EDLI+K  ++ GVV     +    +H
Sbjct:    9 EVAVTKSILKSTFNMWMDIIDVDVVIIGAGPSGLTAAKYLAQN-GVKTVVLERHLSFGGGTWGGGMGFPNIVVEKPADEILREAGIKLDEVDG-----EDELFTADSVEVPAKLGVAAIDAGAKILTGIVVEDLILKEDKIAGVVIQSYAIEKAGLH 159
The following BLAST results are available for this feature:
BLAST of EY720036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
THI4_METMP5.585e-1131.85Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM79.526e-1130.57Putative thiazole biosynthetic enzyme OS=Methanoco... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720036 ID=EY720036; Name=EY720036; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGCAAATCAAATTACTTCTCATTATCAAACTTCTAAGCAG
CAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAGCCATGGCTTCTAC
AGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGACTCAT
CCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACCCATC
AAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCC
TTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATTGTTT
CTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTATGCTGAC
ACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTA
TGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAGTCTG
TTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATG
GTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCGACTA
CGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTCACCT
CCACTATAATGAGCAAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAAT
GCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCGGCAGAGTTGGTGGTGT
GGTGACCAACTGGGCGTTGGTGTCAATGATCACGATACACAGTCTGCATG
GATCCCCATGTATGGAAGCGAANGTGGTGTGAGCTCTTGTGGCATGATGG
GGCTTTGGGGCACTGGAGTAAAGAGGTGAAGAGATCNGAATGATTTGAGA
ATGCCTGGAATGAAGCACTGGACTGACTCTGCAGAGAT
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