EY720021

Overview
NameEY720021
Unique NameEY720021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11223 contig Csv1_Contig11223:17..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA2_ACEAT (V-type proton ATPase catalytic subunit A isoform 2 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.150e-15
Identity = 40/81 (49.38%), Postives = 58/81 (71.60%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGA--GMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALEDE 247
            +MRNI+ F+ LA QA+E+ A    DGQK+   +IK +LGDL Y++ SQKFEDP++GE  +  +  +L+++L   FRALEDE
Sbjct:  531 MMRNIVTFHRLATQAIERTATGNSDGQKLLSNIIKAKLGDLLYKVSSQKFEDPSDGESVVTGRLNELNDELKEKFRALEDE 611          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA2_DROME (V-type proton ATPase catalytic subunit A isoform 2 OS=Drosophila melanogaster GN=Vha68-2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.713e-12
Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPA-EGEPALVAKFKKLHEDLTAGFRALED 244
            ++RNII FY++A  +VE  A  +  KIT+ +I+  +G++ Y+L S KF+DP  +GE  + A F++LHEDL   FR LED
Sbjct:  537 MLRNIIDFYDMARHSVESTAQSEN-KITWNVIREAMGNIMYQLSSMKFKDPVKDGEAKIKADFEQLHEDLQQAFRNLED 614          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_DICDI (V-type proton ATPase catalytic subunit A OS=Dictyostelium discoideum GN=vatA PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALED 244
            +++N++ FYNLA +AVE        K+T+  IK+ L ++ +R+ S KF+DP +GE  L A F  L+ED+   FR   D
Sbjct:  541 MLKNMMTFYNLAQKAVESSTA--DNKVTWNQIKNELKEIIHRITSMKFQDPTDGEQTLTAHFSTLNEDIITAFRNFSD 616          
BLAST of EY720021 vs. ExPASy Swiss-Prot
Match: VATA_ANOGA (V-type proton ATPase catalytic subunit A OS=Anopheles gambiae GN=Vha68-2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 2
Query:   11 VMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPA-EGEPALVAKFKKLHEDLTAGFRALED 244
            +++N+I FY++A  AVE  A  +  KIT+ +I+  +G + Y+L S KF+DP  +GEP + A F +L+ED+   FR LED
Sbjct:  537 MLKNMIGFYDMARHAVETTAQSEN-KITWNVIRDSMGQILYQLSSMKFKDPVKDGEPKIKADFDQLYEDMQQAFRNLED 614          
The following BLAST results are available for this feature:
BLAST of EY720021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
VATA2_ACEAT1.150e-1549.38V-type proton ATPase catalytic subunit A isoform 2... [more]
VATA2_DROME7.713e-1245.57V-type proton ATPase catalytic subunit A isoform 2... [more]
VATA_DICDI8.528e-1139.74V-type proton ATPase catalytic subunit A OS=Dictyo... [more]
VATA_ANOGA8.528e-1143.04V-type proton ATPase catalytic subunit A OS=Anophe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-A03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720021 ID=EY720021; Name=EY720021; organism=Citrus sinensis; type=EST; length=610bp
CCACGCGTCCGTGATGCGTAACATTATCCATTTCTATAACTTGGCCAATC
AGGCCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACC
CTTATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAA
GTTTGAGGACCCAGCAGAAGGAGAACCAGCTCTGGTTGCTAAATTCAAAA
AGCTGCATGAGGATCTGACCGCTGGTTTCCGCGCCCTCGAGGATGAAACT
CGATGATTGAAAGTGTCAAGTTAGATTCTTTGTAGTCCCAGCGGCACCTC
TGATCTTACGGTAACAACAGTTGGCTTCTCGATGTTCCATTGAATGGAGA
ACCAAAATGTTGGTGGGTCCATGTTATGCCACTTTGCAGTGCTTGTTTGG
CCTTCTAGTTGCAGTGTGGTAAATTTGATTCTATTATGTATTTTTTTGTT
CTTCCTGTCGTTCCCTCAATTCCTTTTTTTGACTAGTGATCAAAAGTTCG
AAGTCCAATCCTTATTTATGTATTTATGCAATAAGTGTGTGTATTGAGTG
ACGCACATGTGTATTGATTTTGTTAAATGGCTTANGAAAAACTGATGTCC
CGTTTTGTTC
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