EY693273

Overview
NameEY693273
Unique NameEY693273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: TPC1_PICST (Mitochondrial thiamine pyrophosphate carrier 1 OS=Pichia stipitis GN=TPC1 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 48/178 (26.97%), Postives = 86/178 (48.31%), Query Frame = 2
Query:  167 VNGGASGMLATCVIQPIDMIKVRIQLGQG----SAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSV 688
            V+G  +G+++T V  P D+++ R+         S     + ++ +EGF   + G+   +L  +T T     S+ ++     E    + +P +++ +CG  AGA    +  P D    R Q    L  + +R    AF+ L  IVA+EGVL L+KG G +V++    +   L  Y+ S+
Sbjct:  123 VSGTGAGVVSTLVTYPFDLLRTRLAANSEKKLLSMSGTAREIISSEGFTGLFAGIKPAMLSISTTTGLMFWSYELVR----ETLGDRDIP-FKEGICGFIAGATSKGITFPLDTIRKRTQMYKILYNSAKR--VGAFRLLADIVANEGVLGLYKGFGISVLKTSPTSAVSLFVYEYSL 293          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: BT1_MAIZE (Protein brittle-1, chloroplastic/amyloplastic OS=Zea mays GN=BT1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 47/172 (27.33%), Postives = 77/172 (44.77%), Query Frame = 2
Query:  149 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAGTVTKT---MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTN---KAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAM 646
            P   P V G  +G  +T    P+++IK R+ + +     V      +L++EG    Y+GL+  L+    Y      ++  L     +A     G  +      L G  AGAI +S   P ++A  +MQ  A      R+ Y N   A+Y I+  EG   L++G GP+ ++ M
Sbjct:  228 PIPTPLVAGALAGFASTLCTYPMELIKTRVTIEKDVYDNVAHAFVKILRDEGPSELYRGLTPSLIGVVPYAACNFYAYETLKRLYRRATGRRPGADVGPVATLLIGSAAGAIASSATFPLEVARKQMQVGAV---GGRQVYQNVLHAIYCILKKEGAGGLYRGLGPSCIKLM 396          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: TPC_HUMAN (Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 55/185 (29.73%), Postives = 81/185 (43.78%), Query Frame = 2
Query:  164 FVNGGASGMLATCVIQPIDMIKVRIQLGQGSAGTVTK------TMLKNEGFGAFYKGLSAGLLRQATYTTARLG---SFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQAD----ATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYD 679
            FV GG +  +AT  + P+D+++ R    QG             TM ++EG   FYKGL+  L+    Y   +     S + L   AI A +GK     Q  LCG  AG I  ++  P DL   R+Q      A     Q R Y        +++  EG L  +KG  P++++A      M  SY+
Sbjct:  122 FVCGGLAACMATLTVHPVDVLRTRFA-AQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPA-EGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYE 304          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: S2535_MOUSE (Solute carrier family 25 member 35 OS=Mus musculus GN=Slc25a35 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 61/227 (26.87%), Postives = 98/227 (43.17%), Query Frame = 2
Query:  164 FVNGGASGMLATCVIQPIDMIKVRIQLGQG---SAGTVTK----------TMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKA-IEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNA--FQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFR--DACGLSELPTVIGASTVSGFFASACSLPFD 790
            F+  G +   A     P++++K R+QL QG   + GT  +          T+ K +G  A  KGL   LL Q      RLG++ +  ++  +  N+G   P+ + A  G  AG +GA +GSP  +    +QA A    A    Y +   FQAL  I    G++ LW+GA   + R +  +   L ++    +     +          + A+ VSG        PFD
Sbjct:    3 FLMSGVAACGACVFTNPLEVVKTRMQL-QGELQAPGTYQRHYRNVFHAFFTIGKVDGLAALQKGLGPALLYQFLMNGIRLGTYGLAESRGYLHTNEGTHSPV-RSAAAGALAGVMGAYLGSPIYMVKTHLQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGAVGGLPRVVIGSSTQLCTFSSIKDLLSQWEIFPPQSWKVALAAAMVSGVAIVVAMTPFD 227          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: ODC_MOUSE (Mitochondrial 2-oxodicarboxylate carrier OS=Mus musculus GN=Slc25a21 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 51/193 (26.42%), Postives = 89/193 (46.11%), Query Frame = 2
Query:  149 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQLG------QGSAGTVTKTMLKNEGFG--AFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRD 703
            P +   + G  SG+    V+ P +++KV +Q+       Q S     + ++K EG G     KGL+A L R   +     G +  + N  I ++    L   +K   G  +G +G+    P D+A  R+Q    +P   +  Y + F+ +  I  +EG+LAL+KG  P V+R       ML  Y+ +  + ++
Sbjct:  107 PGLTFLIAGLGSGLTEAVVVNPFEVVKVGLQVNRNLFKEQPSTFAYARQIIKKEGLGFQGLNKGLTATLGRHGIFNMVYFGFYHNVKN-IIPSSKDPTLEFLRKFGIGFVSGTMGSVFNIPFDVAKSRIQGPQPVPGEIK--YRSCFKTMEMIYREEGILALYKGLVPKVMRLGPGGGVMLLVYEYTYAWLQE 296          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: ODC_BOVIN (Mitochondrial 2-oxodicarboxylate carrier OS=Bos taurus GN=SLC25A21 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 51/193 (26.42%), Postives = 87/193 (45.08%), Query Frame = 2
Query:  149 PTVKPFVNGGASGMLATCVIQPIDMIKVRIQLG------QGSAGTVTKTMLKNEGFG--AFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRD 703
            P +   V G  SG+    V+ P +++KV +Q        Q S  +  + ++K EG G     KG +A L R   +     G +  + N  I  N    L   +K   GL +G I + +  P D+A  R+Q    +P   +  Y   F+ +  +  +EG+LAL+KG  P ++R       ML  Y+ +  + ++
Sbjct:  108 PALTFAVAGLGSGLTEAIVVNPFEVVKVGLQANRNRFTEQPSTMSYARHIIKKEGLGLGGLNKGFTATLGRHGVFNMVYFGFYFNVKN-IIPVNKDPTLEFLRKFGIGLLSGTIASVINIPFDVAKSRIQGPQPVPGEIK--YKTCFKTMATVYQEEGILALYKGLLPKIMRLGPGGAVMLLVYEYTYSWLQE 297          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 53/186 (28.49%), Postives = 82/186 (44.09%), Query Frame = 2
Query:  188 MLATCVIQPIDMIKVRIQLGQGSAGTVTKT----MLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKA-------LCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACG 712
            +LA  ++ P++ IKVR+Q         T+     ++ NEGFG  Y+GL+    RQ  YT  +  SF  +  +A+    GKP  +Y KA         G  AG + A +  PAD+ + ++ ++       ++    A  A  RI  + G   LW G G  +V    L       YD     F+  CG
Sbjct:  132 LLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIPYTMMKFASFERIV-EALYTYIGKPKNMYSKAEKIGISFAGGYMAGVLCAIISHPADVMVSKLNSN-------KKAGEGAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDS----FKIMCG 305          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: MCFX_DICDI (Mitochondrial substrate carrier family protein X OS=Dictyostelium discoideum GN=mcfX PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 47/177 (26.55%), Postives = 80/177 (45.20%), Query Frame = 2
Query:  170 NGGASGMLATCVIQPIDMIKVRIQL-GQGSAGTVTKTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFF 697
            +GG +GM       P++++K+R+Q+ G        K ++   G    YKG ++ LLR   ++      +  + +   +   G+ + L +  LCG+TAG+I ASV +P D+   R+Q     P     +Y        + +  EG  AL+KG  P V     L    L  Y+    F+
Sbjct:  125 SGGLAGMCQVVATNPMELVKIRMQVSGLSGKKASLKEVVSELGIKGLYKGTASTLLRDVPFSMIYFSIYGRMKHNLTDQETGE-IGLPKILLCGITAGSIAASVSTPFDVIKTRIQVK---PGPNDPHYKGIADCFRKTIQSEGPKALFKGVLPRVCIISPLFGITLVVYEIQKSFY 297          
BLAST of EY693273 vs. ExPASy Swiss-Prot
Match: CMC_DROME (Calcium-binding mitochondrial carrier protein Aralar1 OS=Drosophila melanogaster GN=aralar1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 53/241 (21.99%), Postives = 106/241 (43.98%), Query Frame = 2
Query:  164 FVNGGASGMLATCVIQPIDMIKVRIQLGQGSA--GTVT--------KTMLKNEGFGAFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYTNAFQALYRIVADEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFRDACGLSELPTVIGASTVSGFFASACSLPFDYVKHKFRKCTRCSGKYHTRLYD 856
            F  G  +G +   V+ PID++K R+Q  +  +  G V         K ++++EGF   Y+GL   L+  A     +L    ++ +K  +      +P + + L G  AGA      +P ++  IR+Q    + +  +          + +V + G+  L+KGA   ++R +  +     +Y  +     D  G +   T++ A  ++G  A++   P D +K + +   R     +T ++D
Sbjct:  346 FTLGSFAGAVGATVVYPIDLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLPQLMGVAPEKAIKLTVNDLVRDKLTDKKGN--IPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQVAGEIASGSKIR-------AWSVVRELGLFGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKDGYNHPLTLLAAGAIAGVPAASLVTPADVIKTRLQVVARSGQTTYTGVWD 577          
The following BLAST results are available for this feature:
BLAST of EY693273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
TPC1_PICST5.872e-1126.97Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
BT1_MAIZE5.872e-1127.33Protein brittle-1, chloroplastic/amyloplastic OS=Z... [more]
TPC_HUMAN7.668e-1129.73Mitochondrial thiamine pyrophosphate carrier OS=Ho... [more]
S2535_MOUSE7.668e-1126.87Solute carrier family 25 member 35 OS=Mus musculus... [more]
ODC_MOUSE7.668e-1126.42Mitochondrial 2-oxodicarboxylate carrier OS=Mus mu... [more]
ODC_BOVIN7.668e-1126.42Mitochondrial 2-oxodicarboxylate carrier OS=Bos ta... [more]
MPCP_SCHPO7.668e-1128.49Probable mitochondrial phosphate carrier protein O... [more]
MCFX_DICDI7.668e-1126.55Mitochondrial substrate carrier family protein X O... [more]
CMC_DROME7.668e-1121.99Calcium-binding mitochondrial carrier protein Aral... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-G12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693273 ID=EY693273; Name=EY693273; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTGCCTCCTTACTCCTCCCTCTCTCCCTCAGTCTGTACTC
AATCTTCTTTCTCTCTCTCTCTAGCCAGCTTAAGCTTTCTTGGATCCAAA
AGGAAAAAAATGGGAGAGGAGAAGAAGCCATAATCAGCTGGTGTATGGCC
CACCGTTAAGCCTTTTGTCAATGGTGGTGCCTCTGGTATGCTTGCCACCT
GTGTCATTCAGCCCATCGATATGATCAAGGTGAGAATTCAGCTGGGCCAG
GGATCCGCCGGTACTGTGACAAAGACTATGCTTAAGAATGAGGGTTTTGG
TGCCTTTTACAAGGGGTTGTCTGCTGGACTGCTCAGGCAAGCTACATATA
CCACTGCTCGTCTTGGATCATTTAGGATCTTGACAAACAAAGCAATTGAA
GCCAATGACGGGAAGCCTCTTCCATTGTATCAGAAAGCCTTGTGTGGGCT
AACTGCTGGTGCTATTGGAGCTTCTGTTGGTAGTCCAGCAGATTTGGCAC
TTATCCGTATGCAGGCTGATGCCACACTACCTGCTGCTCAACGCCGCAAT
TACACTAATGCCTTCCAAGCTCTTTATCGTATTGTTGCAGATGAAGGGGT
CTTAGCACTTTGGAAAGGTGCAGGTCCTACTGTTGTGAGAGCTATGGCAT
TGAACATGGGCATGCTTGCCTCCTACGATCAAAGTGTTGAGTTTTTCAGA
GATGCGTGTGGCTTGTCTGAACTTCCTACAGTAATCGGGGCGAGTACAGT
GTCAGGGTTCTTTGCTTCAGCTTGCAGTTTACCCTTTGATTATGTCAAAC
ACAAATTCAGAAAATGCACCAGATGCTCAGGAAAGTATCATACCAGGCTC
TATGACTGTGCATGAAACCCTCAGGCTGTTGACACTCAAATTTACACTGT
TTCCCGGGTACTGTGTCGGAT
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