EY693259

Overview
NameEY693259
Unique NameEY693259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis GN=ispG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  234 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            D    R   F +LQ   +R+   EYVSCP CGRTLFDL  +S  IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG  PG IDLYV    VK  I +E A + L+QL+K+HG W EP
Sbjct:  481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELVQLLKEHGVWKEP 601          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  234 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            D    R   F +LQ   +R+   EYVSCP CGRTLFDL  +S  IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG  PG IDLYV    VK  I +E A + L+QL+K+HG W EP
Sbjct:  481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELVQLLKEHGVWKEP 601          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  234 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            D    R   F +LQ   +R+   EYVSCP CGRTLFDL  +S  IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG  PG IDLYV    VK  I +E A + L+QL+K+HG W EP
Sbjct:  481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELVQLLKEHGVWKEP 601          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLT2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ispG PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.559e-35
Identity = 72/121 (59.50%), Postives = 84/121 (69.42%), Query Frame = 3
Query:  234 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPG-VSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            D    R   F +LQ   +R+   EYVSCP CGRTLFDL  +S  IRE+T HLPG + IA+MGCIVNGPGEMADADFGYVG  PG IDLYV    VK  I +E A + L+QL+K+HG W EP
Sbjct:  481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCIPIENAEEELVQLLKEHGVWKEP 601          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=ispG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.776e-35
Identity = 69/125 (55.20%), Postives = 86/125 (68.80%), Query Frame = 3
Query:  219 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            + P      +R+ +F  LQ   +R  KTEY+SCP CGRTLFDL E++  IR KT HL G+ IA+MGCIVNGPGEMADADFG+VG   G IDLYV  T VK  I ME A + L +L+++HG W +P
Sbjct:  481 DLPNIPLPTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTTRIRNKTKHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMIDLYVKHTCVKAHIPMEDAEEELFRLLQEHGVWKDP 605          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_PROMM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispG PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.955e-34
Identity = 65/112 (58.04%), Postives = 86/112 (76.79%), Query Frame = 3
Query:  261 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEPP 596
            +++LQ   +R T  EY+SCPSCGRTLF+L+E+  ++R+ TSHL G+ IA+MGCIVNGPGEMADAD+GYVG  PG I LY G+  +++ ++     DALIQLIKD GRW +PP
Sbjct:  296 YSILQSIGLRKTMVEYISCPSCGRTLFNLEEVVQKVRDSTSHLVGLDIAVMGCIVNGPGEMADADYGYVGKGPGVISLYRGRDEIRK-VSESEGVDALIQLIKDDGRWVDPP 406          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_PORGI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Porphyromonas gingivalis GN=ispG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.859e-34
Identity = 67/111 (60.36%), Postives = 84/111 (75.68%), Query Frame = 3
Query:  258 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAE 590
            +F +LQ  R+R ++TEY+SCPSCGRTL++LQE  A I+  T+HL  + I IMGCIVNGPGEMADAD+GYVG  PG+IDLY  K  V+RGI  E A   LI+LIK++G W E
Sbjct:  470 AFGILQATRLRMSRTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAGPGRIDLYKQKICVRRGIPQEQAVQQLIELIKENGDWKE 580          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33
Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 3
Query:  261 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRW 584
            F +LQ  R R +KTEY+SCPSCGRTL+DLQ   A I+E TSHL G+ I IMGCIVNGPGEMADAD+GYVG   G+I LY GK  V + I  E A + L+QLIK++G W
Sbjct:  502 FGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGQISLYKGKECVLKNIPEEDAVERLVQLIKENGDW 609          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.267e-33
Identity = 62/111 (55.86%), Postives = 84/111 (75.68%), Query Frame = 3
Query:  261 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            FN+LQ  R+R +KTE++SCP CGRT F+L++ +A I+++ SHL G+ I IMGCIVNGPGEMADADFGYVG   G++ LYVGK  V+  I    A + LI+LI+ +G+W +P
Sbjct:  635 FNILQAARIRMSKTEFISCPGCGRTYFELEKTTALIKQRVSHLKGLKIGIMGCIVNGPGEMADADFGYVGSGKGRVSLYVGKECVEENIPEAEALERLIELIRQNGKWVDP 745          
BLAST of EY693259 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.506e-33
Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 3
Query:  261 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGKIDLYVGKTVVKRGIAMEXATDALIQLIKDHGRWAEP 593
            +++LQ   +R T  EYV+CPSCGRTLF+L+E+  ++R+ TSHL G+ IA+MGCIVNGPGEMADAD+GYVG  PG I LY G+  +++ +  E   +ALIQLIK+ GRW EP
Sbjct:  288 YSILQSLGLRKTMVEYVACPSCGRTLFNLEEVLHKVRDATSHLTGLDIAVMGCIVNGPGEMADADYGYVGKTPGVISLYRGRDEIRK-VPEEEGVNALIQLIKEDGRWVEP 397          
The following BLAST results are available for this feature:
BLAST of EY693259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
ISPG_CHLTR4.559e-3559.504-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTB4.559e-3559.504-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTA4.559e-3559.504-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLT24.559e-3559.504-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLFF7.776e-3555.204-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PROMM2.955e-3458.044-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PORGI3.859e-3460.364-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PARD84.267e-3362.044-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTE4.267e-3355.864-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNPX9.506e-3357.664-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693259 ID=EY693259; Name=EY693259; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCATGATTTACCCTTTAATGAAGATAAAATTGGCAGAGTA
CAGGCAGCTAGGAGGCTATTTGAGTATCTATCAGAAAATAATCTAAACTT
CCCTGTAATTCACCATATTCAGTTTCCGAATGGGATTCACAGGGATGACT
TGGTCATTGGTGCCGGTTCCAATGTAGGAGCCCTTTTAGTCGATGGACTT
GGAGATGGTTTGCTGTTAGAAGCCCCAGGACAAGATTTTGATTTTCTGAG
GGACACATCTTTCAACTTACTACAAGGTTGCAGAATGAGGAATACAAAGA
CGGAGTATGTCTCATGTCCATCATGTGGTAGAACTTTGTTTGACCTTCAA
GAAATAAGTGCAGAGATACGAGAGAAAACATCGCACTTGCCCGGTGTTTC
GATTGCTATCATGGGTTGCATTGTCAATGGACCTGGAGAGATGGCTGATG
CAGACTTTGGGTATGTTGGTGGGGCTCCTGGAAAGATTGACCTGTATGTC
GGGAAGACTGTGGTGAAGCGTGGTATTGCAATGGAGCANGCAACCGATGC
CTTGATCCAACTAATAAAGGATCACGGGCGCTGGGCGGAGCCTCCCGCAG
AAGAGTANGATATGGTAATTTCCATCAACAGATATACAATAAAGACTCAG
TTGAAAGGAGACCACCATACCCCAGCTGNTGTATATTAAATTCACATGGC
ACAAAGACTACACAGTAATAGCAGATCATATAAATTTTTCCGTCAGATGG
AGCATCTATAGTTCACCAAGGAAAGCGTTATATGTTCCCTCAGTGTATGC
AGATAAAGCTGTTACCACTCCATTAGTAACAGGCCCAATGTTTCTAACTT
TNGTTTCCTTACCAAACCAATAATAATGGATTCCTATGGGATTTATAGCT
CTAGGGAACCACCTGAATATGGCTGGGGGGTTCC
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