EY693258

Overview
NameEY693258
Unique NameEY693258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.908e-45
Identity = 99/199 (49.75%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEE 684
            YDR +  FSP+GRLFQV YA EA+K G+TA+G+K K+GVVLAVEKRITS L+EPSS EKI  ID+HI  A SG+IADAR LV+ AR+E Q +R +YGEP+ +    + +CDL        +    RPFG +LL+AG +E  P L+ TDPSG +++  A AIGS    A +   E Y  D+   +A  +A+      LEE
Sbjct:   10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEE 204          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.908e-45
Identity = 99/199 (49.75%), Postives = 130/199 (65.33%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEE 684
            YDR +  FSP+GRLFQV YA EA+K G+TA+G+K K+GVVLAVEKRITS L+EPSS EKI  ID+HI  A SG+IADAR LV+ AR+E Q +R +YGEP+ +    + +CDL        +    RPFG +LL+AG +E  P L+ TDPSG +++  A AIGS    A +   E Y  D+   +A  +A+      LEE
Sbjct:   10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEE 204          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.960e-45
Identity = 92/190 (48.42%), Postives = 129/190 (67.89%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIAL 657
            YDR +  FSPEGRL+QVEYA EA++ G+TAIG+  K+GVVLAV++RITS L++  S+EKI +ID+H+  A SGL+ADAR L++ AR+E Q +R +YGE +++E   + +CD+   +    +    RPFGVSLLIAG D+N   L+ TDPSG   +  A AIGS        L ++Y  D+TL E   +A+
Sbjct:    9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAY---TQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAI 195          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.478e-45
Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEK 687
            YDR +  FSP+GRLFQVEYA EA+K G+TA+G+K  +GVVL V+KRITS L+E  S+EKI +IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE  ++ +CD    +    +    RP+G +LLIAG D+N P L+ TDPSG   +  A AIG+            Y +D+ +  A  + +       E K
Sbjct:    7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEGK 203          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.105e-44
Identity = 94/203 (46.31%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEKSLP 696
            YDRG+  FSP+GRL+QVEYA EA+K G+ +IG++T EGVVLA +KR  SPL+EP+SVEKI + D+HIG A +G +ADAR L++ AR ++Q +R  YGEP+ +E+ T+ + D   ++    +   +RPFGV+LLI G +   P LY TDPSGT ++  A +IG+        L E +  DLTL E   +AL    +  +E + P
Sbjct:   10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQY---TQVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDEGTAP 209          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.443e-44
Identity = 94/200 (47.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEK 687
            YDR +  FSP+GRLFQVEYA EA+K G+TA+G+K  +GVVL V+KRITS L+E  S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE  ++ +CD    +    +    RP+G +LLIAG D+N P L+ TDPSG   +  A AIG+           +Y +D+ +  A  + +       E K
Sbjct:    9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEGK 205          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.163e-44
Identity = 93/200 (46.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEK 687
            YDR +  FSP+GRL+QVEYA EA+K G+TA+G+K  EGVVL V+KR+TS LLEP S+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY EP+ VE   + LCD    +    +   +RP+G +LLIAG  +    L+ TDPSGT  +  A  IG+       +  ++Y +D     A  + +    A  E K
Sbjct:    9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTY---TQFGGARPYGTALLIAGVSDGEARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALHAATEGK 205          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.596e-43
Identity = 92/200 (46.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEK 687
            YDR +  FSP+GRL+QVEYA EA+K G+TA+G+K  +G+VL V+KR+ S LLEPSS+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE  ++ LCD    +    +   +RP+G +LLIAG  +    L+ TDPSGT  +  A  IG           E+YN + ++++A  + L    A  E K
Sbjct:    9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTY---TQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKALHAATEGK 205          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.596e-43
Identity = 87/190 (45.79%), Postives = 130/190 (68.42%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIAL 657
            YDRG+  FSP+GRL+QVEYA EA+K G+ ++G++T +G+VLA +KR  SPL+EP+SVEKI + D+H+G A +G +ADAR L++ AR + Q +R  YGEP+ +E+ T+ + D   ++    +   +RPFGV+LLI G ++  P LY TDPSGT ++  A +IG+        L E Y ++L+L E   +AL
Sbjct:   10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQY---TQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLAL 196          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.084e-43
Identity = 93/200 (46.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEK 687
            YDR +  FSP+GRLFQVEYA EA+K G+TA+G+K  +GVVL V+KRITS L+E  S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE  ++ +CD    +    +    RP+G +LLIAG D+N P L+ TDPSG   +  A AIG+            Y +D+ +  A  + +       E K
Sbjct:    9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGK 205          
The following BLAST results are available for this feature:
BLAST of EY693258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PSMA_THEK12.908e-4549.75Proteasome subunit alpha OS=Thermococcus sp. (stra... [more]
PSMA_PYRKO2.908e-4549.75Proteasome subunit alpha OS=Pyrococcus kodakaraens... [more]
PSMA_METJA4.960e-4548.42Proteasome subunit alpha OS=Methanocaldococcus jan... [more]
PSMA_METAC6.478e-4547.50Proteasome subunit alpha OS=Methanosarcina acetivo... [more]
PSMA1_HALVO1.105e-4446.31Proteasome subunit alpha 1 OS=Halobacterium volcan... [more]
PSMA_METBF1.443e-4447.00Proteasome subunit alpha OS=Methanosarcina barkeri... [more]
PSMA_METMJ7.163e-4446.50Proteasome subunit alpha OS=Methanoculleus marisni... [more]
PSMA_METPE1.596e-4346.00Proteasome subunit alpha OS=Methanosphaerula palus... [more]
PSMA_HALWD1.596e-4345.79Proteasome subunit alpha OS=Haloquadratum walsbyi ... [more]
PSMA_METMA2.084e-4346.50Proteasome subunit alpha OS=Methanosarcina mazei G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693258 ID=EY693258; Name=EY693258; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCAGTTCCGGTATCAACTCTTAAGCTCAGGTTTCCAGATC
CAATCAGCAACAAAACATGTTCCTTACAAGGACTGAGTATGATAGAGGAG
TGAACACTTTCTCTCCAGAAGGAAGATTGTTTCAGGTCGAATATGCTATT
GAGGCCATTAAGCTGGGTTCAACTGCAATTGGGTTGAAGACGAAAGAAGG
GGTTGTGCTTGCTGTTGAGAAACGCATTACTTCACCACTGCTGGAGCCCA
GCAGTGTGGAGAAGATTATGGAAATTGATGAGCATATAGGATGTGCTATG
AGTGGATTGATTGCTGATGCTCGTACACTTGTTGAACATGCAAGGGTTGA
AACTCAGAATCATAGATTCTCATATGGTGAGCCAATGACCGTAGAATCTA
CTACACAAGCACTCTGTGACCTGGCGCTACGCTTTGGTGAAGGCGATGAA
GAATCCATGTCTCGACCATTTGGAGTATCCCTTCTTATTGCTGGATCCGA
CGAGAATGGACCTAGCCTGTACTATACAGATCCATCTGGCACATTCTGGC
AATGCAATGCAAAGGCTATTGGTTCANGTTCAGAAGGAGCTGACAGTTCT
CTCCNAGAGCAATATAACAAGGATTTAACCCTTCAGGAAGCAGAGACAAT
TGCTCTATNCATTTTTGAAGCAGTTTTGGAAGAAAAGTCACTCCCAACAA
TGTTGATATCGCAAAGGTAGCTCCAACGATCATCTCTATACCCCTTCTGA
GGTGGAGGCTGTCATCAATCGCCTATGAGTATCTGAAGAAAATAATTAAA
AATTCTTCCCTGGCTTTAGCGGGGTTTCTTCANTCCTTGCAGGGCAAGGG
ACTTGGTTTGTTGGTTGTTAGGGAAAAAATATATTTGTTATGATTGGGAT
GGCCCCCTTGAACCCTTTTGTTTGGGGCGGGGTTGAACTGCCAT
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