EY693258

Overview
NameEY693258
Unique NameEY693258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length944
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA7A_ORYSI (Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica GN=OsI_029135 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 6.078e-35
Identity = 85/200 (42.50%), Postives = 118/200 (59.00%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLE 681
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  S+ KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  +P+TVE  T+ +  L  ++    +    RPFG+S LI G D     P+LY TDPSGTF    A A G  S      L + Y KD + +E   +A+     V+E
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KDTSGKETIKLAIRALLEVVE 199          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.938e-35
Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSS--VEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAI-GSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEKSL 693
            YD+    FSPEGR++QVEYA+ AI+     +G+  K+G+VLA EK+ T+ LL+ S+   EK+ +IDEH+ CA++G+ +DA  L+ +AR+ +Q   + Y EPM VE     +CD    +    +    RPFGVS L AG D + G  LY +DPSG F    A +I G  S+ A S L   Y  D++L+EA  +AL +    ++  ++
Sbjct:    5 YDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPMPVEQLVSQICDTKQGY---TQYGGLRPFGVSFLYAGWDRHYGFQLYQSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDRSNI 207          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.309e-34
Identity = 86/214 (40.19%), Postives = 126/214 (58.88%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEE--KSLPTMLISQR 717
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  SV KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  + +TVE  T+ +  L  ++    +    RPFG+S LI G D   + P+LY TDPSGTF    A A G  S      L + Y K+ + +E   +A+     V+E   K++   +++Q+
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGKETIKLAIRALLEVVESGGKNIEIAVMTQK 213          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.309e-34
Identity = 86/214 (40.19%), Postives = 126/214 (58.88%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEE--KSLPTMLISQR 717
            YDR +  FSP+G LFQVEYA+EA++ G+ A+G++  + VVL VEK+ T  L +  SV KI  +D HI  A +GL ADAR L+  ARVE Q+HR +  + +TVE  T+ +  L  ++    +    RPFG+S LI G D   + P+LY TDPSGTF    A A G  S      L + Y K+ + +E   +A+     V+E   K++   +++Q+
Sbjct:    4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGKETIKLAIRALLEVVESGGKNIEIAVMTQK 213          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.309e-34
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEKSL 693
            YDR V  +SP+G L QVEYA EA++ GST +GL+T   +V+ VEKR    L E   V KI  +D+H+    SGL ADAR LV  A++E Q+HR ++ +P TVE  T+ +  L   + + +     RPFG+S L+ G DE+G P L+ TDPSG F++  A   G  S+     + +  ++ LT+ +       I   ++   SL
Sbjct:    5 YDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGR---RPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSL 204          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 5.145e-34
Identity = 86/211 (40.76%), Postives = 122/211 (57.82%), Query Frame = 1
Query:   79 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNK--DLTLQEAETIALXIFEAVLEEKSLPTML 705
            R +YD  V T+SP GRLFQVEYA+EA+K GS AIGL+++  VVLA   +  S L   S   KI ++D+HIG A++GL AD R L  + R E+ NH F+Y  P+ V      L D A       + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L  ++    D + ++    A+      L+ ++L + L
Sbjct:    3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGETLKSSL 208          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 6.720e-34
Identity = 81/179 (45.25%), Postives = 109/179 (60.89%), Query Frame = 1
Query:   79 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQY 615
            R +YD  V T+SP GRLFQVEYA+EA+K GS AIGL+++  VVLA   +  S L   S   KI ++D+HIG A++GL AD R L  + R E+ NH F+Y  P+ V      L D A       + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L  ++
Sbjct:    3 RNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKA---QVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKF 176          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.146e-33
Identity = 81/204 (39.71%), Postives = 116/204 (56.86%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE-PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLEEKSL 693
            YD     FSPEGRL+QVEYA+EAI     A+G+  K+G+VLA EK++TS LLE   S EK+  I +++ CA++GL ADA  L+ +AR   Q +  ++ E M  E   + +CDL   +    +    RPFGVS L AG D   G  L+ ++PSG +    A +IG  S    S + ++Y  D+ L EA  +A+      L+  SL
Sbjct:    5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY---TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSL 205          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.955e-33
Identity = 83/199 (41.71%), Postives = 115/199 (57.79%), Query Frame = 1
Query:   88 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHAR-VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLE 681
            Y   + TFSP G+L Q+EYA+ A+  G TA+G+K   G+VLA EK+ +SPL +PSS+ KI  I  +IG   SG+  D R LV+ AR V    ++  Y E        Q   D+A    E  +    RP+GVSLLIAG DE GP LY  DPSG+++   A AIG  +  A + L ++Y + L L++A  IAL   +  +E
Sbjct:    5 YSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQ---DVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIE 200          
BLAST of EY693258 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.335e-33
Identity = 78/204 (38.24%), Postives = 125/204 (61.27%), Query Frame = 1
Query:   73 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSXSEGADSSLXEQYNKDLTLQEAETIALXIFEAVLE 681
            ++   YDR +  FSP+G LFQVEYA+EA++ G+ A+G++ K+ +VL VEK+ T+ L +  S+ KI+++D+HI    +GL AD+R L+  A +E Q++R +  +  +VE  ++ +  +  R+    +    RPFG+S LI G D +G P+LY TDPSG++    A AIG  S+     L + Y     + E E+I L +  A+LE
Sbjct:    1 MSSARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRY---TQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNYT---DVSEEESIKLAV-RALLE 197          
The following BLAST results are available for this feature:
BLAST of EY693258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PSA7A_ORYSI6.078e-3542.50Proteasome subunit alpha type-7-A OS=Oryza sativa ... [more]
PSA4_DICDI7.938e-3539.81Proteasome subunit alpha type-4 OS=Dictyostelium d... [more]
PSA7B_ORYSJ2.309e-3440.19Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA7B_ORYSI2.309e-3440.19Proteasome subunit alpha type-7-B OS=Oryza sativa ... [more]
PSA73_DROME2.309e-3438.92Proteasome subunit alpha type-7-1B OS=Drosophila m... [more]
PSA1A_ARATH5.145e-3440.76Proteasome subunit alpha type-1-A OS=Arabidopsis t... [more]
PSA1B_ARATH6.720e-3445.25Proteasome subunit alpha type-1-B OS=Arabidopsis t... [more]
PSA4_SCHPO1.146e-3339.71Probable proteasome subunit alpha type-4 OS=Schizo... [more]
PSA2_NEUCR1.955e-3341.71Probable proteasome subunit alpha type-2 OS=Neuros... [more]
PSA7_DICDI3.335e-3338.24Proteasome subunit alpha type-7 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693258 ID=EY693258; Name=EY693258; organism=Citrus sinensis; type=EST; length=944bp
CCACGCGTCCGCAGTTCCGGTATCAACTCTTAAGCTCAGGTTTCCAGATC
CAATCAGCAACAAAACATGTTCCTTACAAGGACTGAGTATGATAGAGGAG
TGAACACTTTCTCTCCAGAAGGAAGATTGTTTCAGGTCGAATATGCTATT
GAGGCCATTAAGCTGGGTTCAACTGCAATTGGGTTGAAGACGAAAGAAGG
GGTTGTGCTTGCTGTTGAGAAACGCATTACTTCACCACTGCTGGAGCCCA
GCAGTGTGGAGAAGATTATGGAAATTGATGAGCATATAGGATGTGCTATG
AGTGGATTGATTGCTGATGCTCGTACACTTGTTGAACATGCAAGGGTTGA
AACTCAGAATCATAGATTCTCATATGGTGAGCCAATGACCGTAGAATCTA
CTACACAAGCACTCTGTGACCTGGCGCTACGCTTTGGTGAAGGCGATGAA
GAATCCATGTCTCGACCATTTGGAGTATCCCTTCTTATTGCTGGATCCGA
CGAGAATGGACCTAGCCTGTACTATACAGATCCATCTGGCACATTCTGGC
AATGCAATGCAAAGGCTATTGGTTCANGTTCAGAAGGAGCTGACAGTTCT
CTCCNAGAGCAATATAACAAGGATTTAACCCTTCAGGAAGCAGAGACAAT
TGCTCTATNCATTTTTGAAGCAGTTTTGGAAGAAAAGTCACTCCCAACAA
TGTTGATATCGCAAAGGTAGCTCCAACGATCATCTCTATACCCCTTCTGA
GGTGGAGGCTGTCATCAATCGCCTATGAGTATCTGAAGAAAATAATTAAA
AATTCTTCCCTGGCTTTAGCGGGGTTTCTTCANTCCTTGCAGGGCAAGGG
ACTTGGTTTGTTGGTTGTTAGGGAAAAAATATATTTGTTATGATTGGGAT
GGCCCCCTTGAACCCTTTTGTTTGGGGCGGGGTTGAACTGCCAT
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