EY693252

Overview
NameEY693252
Unique NameEY693252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 353.984 bits (907), Expect = 7.026e-97
Identity = 181/250 (72.40%), Postives = 201/250 (80.40%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GL FHLLK  P   S+   + L EAF PL  +          P GP
Sbjct:   58 RMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGP 307          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 7.026e-97
Identity = 178/233 (76.39%), Postives = 196/233 (84.12%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPL 705
            R  DKSMIK RYMYLTEEILKENP++C YMAPSLD RQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GL FHLLK  P   S+   + L EAF PL
Sbjct:   58 RMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDVRQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALIEAFQPL 290          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.199e-96
Identity = 180/250 (72.00%), Postives = 200/250 (80.00%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+G IDGHLRE GL FHLLK  P   S+   + L EAF PL  +          P GP
Sbjct:   58 RMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGGIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHPGGP 307          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.199e-96
Identity = 178/233 (76.39%), Postives = 197/233 (84.55%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPL 705
            R  DKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHL E GL FHLLK  P   S+   + L EAF PL
Sbjct:   58 RMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLVEAGLTFHLLKDVPGIVSKNIDKALIEAFQPL 290          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.199e-96
Identity = 182/233 (78.11%), Postives = 196/233 (84.12%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPL 705
            R  DKS I+KRYM+LTEEIL++NPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+SKITHL+FCTTSGVDMPGADYQLTK++GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP +   DSLVGQALF            PD SVERPL+QLVS SQTILPDS+GAIDGHLREVGL FHLLK  P   S+     L +AF PL
Sbjct:   61 RMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHE--FDSLVGQALFGDGAAAVIVGADPDESVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPL 291          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.044e-96
Identity = 180/250 (72.00%), Postives = 202/250 (80.80%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKS IKKRYMYLTEEIL ENP++CAYMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITH+IFCTTSGVDMPGADYQ+TKL+GLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDS+VGQALF            P   VE+P ++++ T+QTILPDSDGAIDGHLREVGL FHLLK  P   S+   ++L EAF     +   +      P GP
Sbjct:   63 RMCDKSGIKKRYMYLTEEILNENPSVCAYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQMTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGARALIVGADPVPEVEKPCFEMLWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGP 312          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.670e-96
Identity = 179/250 (71.60%), Postives = 200/250 (80.00%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKSMIK+RYMYLTE+ILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTV RLAKDLAENNK ARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GL FHLLK  P   S+   + L EAF PL  +          P GP
Sbjct:   58 RMCDKSMIKRRYMYLTEDILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVFRLAKDLAENNKNARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFKPLGISDYNSIFWIAHPGGP 307          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 2.952e-95
Identity = 179/250 (71.60%), Postives = 199/250 (79.60%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKSMIK+RYMYLTEEILKENP++C  MAPSLDA QD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF            P   +E+P++++V T+QTI PDS+GAIDGHLRE GL FHLLK  P   S+   + L EAF PL  +          P GP
Sbjct:   58 RMCDKSMIKRRYMYLTEEILKENPSVCEIMAPSLDAWQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFEPLGISDYNSIFWIAHPGGP 307          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 3.856e-95
Identity = 184/250 (73.60%), Postives = 197/250 (78.80%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  DKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDIVVVEVPKLGKEAA  AIKEWGQPKSKITH+IFCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLR+AKDLAENNK ARVLVVCSEIT VTFRGP +THLDSLVGQALF            P T  E+PL+QLVS +QT+ PDS GAIDGHLREVGL FHLLK  P+  S    + LSEAF PL  +          P GP
Sbjct:   58 RMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIVVVEVPKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNKAARVLVVCSEITVVTFRGPNETHLDSLVGQALFGDGAAAIIVGSDP-TPAEKPLFQLVSAAQTLAPDSCGAIDGHLREVGLTFHLLKDVPSIVSNNIEKCLSEAFNPLGISDWNSIFWIAHPGGP 306          
BLAST of EY693252 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 5.035e-95
Identity = 178/250 (71.20%), Postives = 199/250 (79.60%), Query Frame = 1
Query:   10 RTGDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLPFHLLKTSPA-*SQRYRENLSEAFAPLASATGTRYSGSLTPVGP 756
            R  +KSMI  RYM+LTE++LK+NP+ C YMA SLDARQDIVV EVPKLGKEAA +AIKEWGQPKSKITHLIFCTTSGVDMPGAD++LTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK ARVLVVCSEIT +TFRGP DTHLDSLVGQALF            P   +E+PL+++VS +QTILPDSDGAIDGHLREVGL FHLLK  P   S+  R++L EAF PL  +          P GP
Sbjct:   58 RMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQALFGDGAGAVIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGP 307          
The following BLAST results are available for this feature:
BLAST of EY693252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS4_MEDSA7.026e-9772.40Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS1_CICAR7.026e-9776.39Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHS8_MEDSA1.199e-9672.00Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS3_MEDSA1.199e-9676.39Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS1_SECCE1.199e-9678.11Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSY_PINST2.044e-9672.00Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHS2_PEA2.670e-9671.60Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS5_MEDSA2.952e-9571.60Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHSD_IPONI3.856e-9573.60Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHS1_DAUCA5.035e-9571.20Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-009-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693252 ID=EY693252; Name=EY693252; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGTACAGGTGACAAGTCGATGATTAAGAAGCGTTACATGTA
CTTAACGGAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGG
CTCCATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAG
CTCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAA
GTCTAAGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGC
CCGGCGCCGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTC
AAGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCT
TCGCCTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTG
TTGTCTGTTCGGAGATCACGGCAGTCACTTTCCGCGGCCCTGCCGATACT
CATCTTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGC
TGTGATCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATC
AGCTCGTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATT
GACGGACACTTGCGCGAAGTCGGTCTCCCTTTCCATTTGCTTAAGACGTC
CCCGGCTTGATCTCAAAGATATAGAGAAAACCTGTCTGAAGCGTTCGCCC
CGCTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCCCGTG
GGCCCGCAATTCTGGACCAGTGGAGTCTAACTGGGCCTCAAAGGGGAGAG
CTGAGGCCACCCTCAGTGTTGAGTGAGACGGTAACTGTCAAGCGCTGGTG
CTGTTCATCCTGACAAAATGAAAAAATTCTGTGAGGAGCCAAACCCCCCC
GGCAAAGGCTTGATG
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