EY693163

Overview
NameEY693163
Unique NameEY693163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_HAEIG (Cysteine desulfurase OS=Haemophilus influenzae (strain PittGG) GN=iscS PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 6.228e-45
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVD RV   M+ F      +GNP SR+H FGW++E AV+ AR+QIADLIGA  +EI+FTSGATES+N++IKG  HFY+ K +H+IT +TEHK VLD+CR L++EGFE+TYL   ADG++
Sbjct:    4 PIYLDYAATCPVDERVAKKMMAFLTIDGTFGNPASRSHKFGWQAEEAVDIARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITCKTEHKAVLDTCRQLEREGFEVTYLSPEADGLI 132          

HSP 2 Score: 41.2022 bits (95), Expect = 6.228e-45
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L++ +AA+ PDT L S+M  NNEIGV+Q ++ IG+
Sbjct:  134 LEKFKAALRPDTILASIMHANNEIGVLQDIKAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHESR (Cysteine desulfurase OS=Shewanella sp. (strain MR-7) GN=iscS PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.116e-45
Identity = 77/129 (59.69%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M  +      +GNP SR+H +GW++E AV+ ARSQ+ADLI A  +EI+FTSGATESNN++IKGV HFY  K +H+IT++TEHK VLD+CR L++EGFE+TYL   A+GI+
Sbjct:    4 PIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDVARSQVADLINADHREIVFTSGATESNNLAIKGVAHFYNKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPEANGII 132          

HSP 2 Score: 36.965 bits (84), Expect = 8.116e-45
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            ++ L AA+  DT L+S+M  NNEIGVI  ++ IG+
Sbjct:  134 MERLEAAMRDDTILVSIMHVNNEIGVIHDVDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHESA (Cysteine desulfurase OS=Shewanella sp. (strain ANA-3) GN=iscS PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.116e-45
Identity = 77/129 (59.69%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M  +      +GNP SR+H +GW++E AV+ ARSQ+ADLI A  +EI+FTSGATESNN++IKGV HFY  K +H+IT++TEHK VLD+CR L++EGFE+TYL   A+GI+
Sbjct:    4 PIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDVARSQVADLINADHREIVFTSGATESNNLAIKGVAHFYNKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPEANGII 132          

HSP 2 Score: 36.965 bits (84), Expect = 8.116e-45
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            ++ L AA+  DT L+S+M  NNEIGVI  ++ IG+
Sbjct:  134 MERLEAAMRDDTILVSIMHVNNEIGVIHDVDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_PROMH (Cysteine desulfurase OS=Proteus mirabilis (strain HI4320) GN=iscS PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.116e-45
Identity = 73/129 (56.59%), Postives = 104/129 (80.62%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M+        +GNP SR+H FGW++E A++ AR+QIADLIGA P+EI+FTSGATE++N+++KGV +FY+ K +H+IT++TEHK +LD+CR L++EGFE+TYL   +DG++
Sbjct:    4 PIYLDYSATTPVDPRVAEKMMQCLTIDGIFGNPASRSHRFGWQAEEAIDIARNQIADLIGADPREIVFTSGATEADNLALKGVANFYQKKGKHIITSKTEHKAILDTCRQLEREGFEVTYLAPKSDGLI 132          

HSP 2 Score: 38.891 bits (89), Expect = 8.116e-45
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L EL AA+  DT L+S+M  NNEIGV+Q +  IG+
Sbjct:  134 LKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_TOLAT (Cysteine desulfurase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=iscS PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 8.116e-45
Identity = 73/129 (56.59%), Postives = 98/129 (75.97%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVDPR  + M+        +GNP SR+H FGW++E AV+ AR+ +ADLIGA P+EI+FTSGATESNN++IKG  HFY  + +H+IT +TEHK VLD+CRHL+ EG+E+TYL   +DG++
Sbjct:    4 PIYLDYSATCPVDPRAAEKMMQCLTLDGNFGNPASRSHRFGWQAEEAVDEARNHVADLIGADPREIVFTSGATESNNLAIKGAAHFYVKQGKHIITCKTEHKAVLDTCRHLESEGYEVTYLDPQSDGLL 132          

HSP 2 Score: 40.817 bits (94), Expect = 8.116e-45
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L ++ AA+ PDT L+S+M  NNEIGVIQ +  IG+
Sbjct:  134 LPQIEAAMRPDTILVSIMHVNNEIGVIQDLAAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_METCA (Cysteine desulfurase OS=Methylococcus capsulatus GN=iscS PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.116e-45
Identity = 72/127 (56.69%), Postives = 96/127 (75.59%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M+PF    +GNP SR+H FGW +E AVE AR ++A L+ A P+EI++TSGATES+N++IKG   FY+ K RH+IT +TEHK VLD+ R L+  GFE+TYL   A+G++
Sbjct:    4 PVYLDYSATTPVDPRVAEKMIPFLTENFGNPASRSHTFGWTAEQAVENAREEVAKLVNADPREIVWTSGATESDNLAIKGAAEFYQTKGRHLITVKTEHKAVLDTMRELESSGFEVTYLEPMANGLL 130          

HSP 2 Score: 42.743 bits (99), Expect = 8.116e-45
Identity = 23/34 (67.65%), Postives = 24/34 (70.59%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIG 721
            LD  RAAI PDT L SVM  NNEIGVIQ +  IG
Sbjct:  132 LDAFRAAIRPDTVLASVMQVNNEIGVIQDIAAIG 165          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_DECAR (Cysteine desulfurase OS=Dechloromonas aromatica (strain RCB) GN=iscS PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.058e-44
Identity = 71/128 (55.47%), Postives = 97/128 (75.78%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M+P+    +GNP SR+H FGW ++ AVE AR Q+A L+ A PKEI++TSGATESNN++IKG  +FY   K +H+IT +TEHK +LD+ R ++++GFE TYL V  DG++
Sbjct:    6 PIYLDYSATTPVDPRVAEKMIPYLCEHFGNPASRSHSFGWVADAAVEEAREQVAALVNADPKEIVWTSGATESNNLAIKGAANFYASTKGKHIITVKTEHKAILDTVREMERQGFEATYLDVKEDGLL 133          

HSP 2 Score: 44.2838 bits (103), Expect = 1.058e-44
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L+  +AAI PDT L SVM  NNE+GVIQP+ E+G+
Sbjct:  135 LEVFKAAIRPDTVLASVMFVNNEVGVIQPIAELGE 169          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SALAR (Cysteine desulfurase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=iscS PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.058e-44
Identity = 75/129 (58.14%), Postives = 104/129 (80.62%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M+ F      +GNP SR+H FGW++E AV+ AR+QIA+L+GA P+EI+FTSGATES+N++IKG  +FY+ K +H+IT++TEHK VLD+CR L++EGFE+TYL   ++GI+
Sbjct:    4 PIYLDYSATTPVDPRVAEKMMQFLTLDGTFGNPASRSHRFGWQAEEAVDIARNQIAELVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQSNGII 132          

HSP 2 Score: 36.5798 bits (83), Expect = 1.058e-44
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L  L AA+  DT L+S+M  NNEIGV+Q +  IG+
Sbjct:  134 LKALEAAMRDDTILVSIMHVNNEIGVVQDIATIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_HAEIE (Cysteine desulfurase OS=Haemophilus influenzae (strain PittEE) GN=iscS PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.058e-44
Identity = 75/129 (58.14%), Postives = 99/129 (76.74%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVD RV   M+ F      +GNP SR+H FGW++E AV+ AR+QIADLIGA  +EI+FTSGATES+N++IKG  HFY+ K +H++T +TEHK VLD+CR L++EGFE+TYL   ADG++
Sbjct:    4 PIYLDYAATCPVDERVAKKMMAFLTIDGTFGNPASRSHKFGWQAEEAVDIARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHILTCKTEHKAVLDTCRQLEREGFEVTYLSPEADGLI 132          

HSP 2 Score: 41.2022 bits (95), Expect = 1.058e-44
Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L++ +AA+ PDT L S+M  NNEIGV+Q ++ IG+
Sbjct:  134 LEKFKAALRPDTILASIMHANNEIGVLQDIKAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_VIBPA (Cysteine desulfurase OS=Vibrio parahaemolyticus GN=iscS PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.378e-44
Identity = 74/129 (57.36%), Postives = 99/129 (76.74%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVDPRV + M+ +      +GNP SR+H +GW++E AV+TAR QIADL+ A P+EI+FTSGATES+N++IKG  HFY  K +HVIT +TEHK VLD CR L++EGFE+TYL   ++G++
Sbjct:    4 PIYLDYSATCPVDPRVAEKMVQYMTMDGTFGNPASRSHRYGWQAEEAVDTAREQIADLLNADPREIVFTSGATESDNLAIKGAAHFYSKKGKHVITCKTEHKAVLDPCRQLEREGFEVTYLEPESNGLI 132          

HSP 2 Score: 40.0466 bits (92), Expect = 1.378e-44
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L++L+AA+  DT L+S+M  NNEIGVIQ +  IG+
Sbjct:  134 LEKLKAAMRDDTVLVSIMHVNNEIGVIQDIAAIGE 168          
The following BLAST results are available for this feature:
BLAST of EY693163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
ISCS_HAEIG6.228e-4558.91Cysteine desulfurase OS=Haemophilus influenzae (st... [more]
ISCS_SHESR8.116e-4559.69Cysteine desulfurase OS=Shewanella sp. (strain MR-... [more]
ISCS_SHESA8.116e-4559.69Cysteine desulfurase OS=Shewanella sp. (strain ANA... [more]
ISCS_PROMH8.116e-4556.59Cysteine desulfurase OS=Proteus mirabilis (strain ... [more]
ISCS_TOLAT8.116e-4556.59Cysteine desulfurase OS=Tolumonas auensis (strain ... [more]
ISCS_METCA8.116e-4556.69Cysteine desulfurase OS=Methylococcus capsulatus G... [more]
ISCS_DECAR1.058e-4455.47Cysteine desulfurase OS=Dechloromonas aromatica (s... [more]
ISCS_SALAR1.058e-4458.14Cysteine desulfurase OS=Salmonella arizonae (strai... [more]
ISCS_HAEIE1.058e-4458.14Cysteine desulfurase OS=Haemophilus influenzae (st... [more]
ISCS_VIBPA1.378e-4457.36Cysteine desulfurase OS=Vibrio parahaemolyticus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693163 ID=EY693163; Name=EY693163; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGCGGACGCGTGGGTACGCAACGAAGCAAAGCAAAGAGAAA
AAGAAGCCGTTGAAAATGGCCTCTAAGCTAATAGCTTCAACTCTCCGCAA
AACCCTAACTAAGGCCGCCAAGACCGCCGGCGTCCGCTCCCTTTCCAACG
CCACAGCCGCCGCGGTTTCTACGGCGTATGAACCTCAGGAGGACCAAAAC
GGAATCACCTTGAAAGGCGTGAGAATCGCGGGCCGCCCTCTCTACCTCGA
TATGCAAGCAACCACTCCAGTCGACCCACGTGTCCTCGATGCCATGCTCC
CTTTCTATCTTTCTCGTTACGGTAACCCCCACTCCCGGACCCACCTCTTC
GGCTGGGAATCCGAAGTCGCCGTCGAAACCGCCCGCTCTCAAATCGCCGA
TCTTATCGGCGCTTCTCCTAAAGAGATAATTTTCACTTCCGGCGCAACGG
AATCGAATAATGTCTCCATCAAAGGAGTCATGCACTTTTACAAGGATAAA
AAGCGCCACGTCATCACCACTCAGACCGAGCACAAGTGCGTTCTCGATTC
GTGCCGGCATCTTCAGCAGGAAGGTTTTGAAATTACTTATTTACCTGTTG
GAGCTGATGGGATTGTTATTTAGATGAATTGCGAGCTGCTATTANGCCTG
ACACCGGCTTGATTTCTGTTATGGGCGGTAACAACGAAATTGGCGTGATT
CAGCCTATGGAAGAAATCGGCCAATTNGAAAAGATTTAAATCCCGTTTCC
ACTGATGCTGCCCAGGCGTGGGGAAGATTCGGNTGATGTCNAAAATGGAT
GTGAGTTGATGTCGTGAGTGGCATAGATTATGGGCCGAAAGGAGCGTGCT
TGNATATAGACGAGGCCAGAATCNAGNTGAACCTTAATAATGGAGGGGCC
AGAAAAAGGATAAGA
back to top