EY693163

Overview
NameEY693163
Unique NameEY693163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHEAM (Cysteine desulfurase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=iscS PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.796e-44
Identity = 76/129 (58.91%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+Y D  ATTPVDPRV   M+ +      +GNP SR+H +GW++E AV+ ARSQ+ADLI A  +EI+FTSGATESNN++IKGV HFY+ K +H+IT++TEHK VLD+CR L++EGFE+TYL  G +GI+
Sbjct:    4 PIYFDYAATTPVDPRVAQKMMQYMTMDGIFGNPASRSHRYGWQAEEAVDVARSQVADLINADHREIVFTSGATESNNLAIKGVAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPGVNGII 132          

HSP 2 Score: 35.4242 bits (80), Expect = 1.796e-44
Identity = 16/35 (45.71%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            ++ L AA+  DT L+S+M  NNEIGV+  ++ IG+
Sbjct:  134 MERLEAAMRDDTILLSLMHVNNEIGVVHDIDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_NEIMA (Cysteine desulfurase OS=Neisseria meningitidis serogroup A GN=iscS PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.796e-44
Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATT VD RV + M+P+    +GNP S +H FGWE+E AVE AR+ IA LI A PKEI+FTSGATES+N++IKG  +FYK K +H+IT +TEHK VLD+ R L+++GFE+TYL V  +G++
Sbjct:    6 PVYLDYAATTTVDKRVAEKMIPYLTETFGNPASNSHAFGWEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKTEHKAVLDTMRELERQGFEVTYLGVQENGLI 132          

HSP 2 Score: 43.5134 bits (101), Expect = 1.796e-44
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L+EL+AAI  DT L+SVM  NNEIGV+Q +  IG+
Sbjct:  134 LEELKAAIRDDTILVSVMWANNEIGVVQDIPAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_VIBHB (Cysteine desulfurase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=iscS PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.341e-44
Identity = 76/129 (58.91%), Postives = 99/129 (76.74%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVDPRV + M+ +      +GNP SR+H +GW++E AV+TAR QIADLI A P+EI+FTSGATES+N++IKG  HFY  K +HVIT +TEHK VLD CR L++EGFE+TYL   ++G+V
Sbjct:    4 PIYLDYSATCPVDPRVAEKMVQYMTMDGTFGNPASRSHRYGWQAEEAVDTAREQIADLINADPREIVFTSGATESDNLAIKGAAHFYSKKGKHVITCKTEHKAVLDPCRQLEREGFEVTYLEPESNGLV 132          

HSP 2 Score: 38.1206 bits (87), Expect = 2.341e-44
Identity = 19/34 (55.88%), Postives = 25/34 (73.53%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIG 721
            L +L+AA+  DT L+S+M  NNEIGVIQ +  IG
Sbjct:  134 LSKLQAAMREDTVLVSIMHVNNEIGVIQDITAIG 167          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_VIBVY (Cysteine desulfurase OS=Vibrio vulnificus (strain YJ016) GN=iscS PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.341e-44
Identity = 72/129 (55.81%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVDPRV + M+ +      +GNP SR+H +GW++E AV+TAR QIA+L+ A P+EI+FTSGATES+N++IKG  HFY  + +HVIT++TEHK VLD+CR L++EGFE+TYL   ++G++
Sbjct:    4 PIYLDYSATCPVDPRVAEKMVQYMTMDGTFGNPASRSHRYGWQAEEAVDTAREQIAELLNADPREIVFTSGATESDNLAIKGAAHFYSKQGKHVITSKTEHKAVLDTCRQLEREGFEVTYLEPESNGLI 132          

HSP 2 Score: 40.817 bits (94), Expect = 2.341e-44
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L +L AA+  DT L+S+M  NNEIGVIQ +E IG+
Sbjct:  134 LSKLEAAMRDDTVLVSIMHVNNEIGVIQDIEAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_VIBVU (Cysteine desulfurase OS=Vibrio vulnificus GN=iscS PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.341e-44
Identity = 72/129 (55.81%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  AT PVDPRV + M+ +      +GNP SR+H +GW++E AV+TAR QIA+L+ A P+EI+FTSGATES+N++IKG  HFY  + +HVIT++TEHK VLD+CR L++EGFE+TYL   ++G++
Sbjct:    4 PIYLDYSATCPVDPRVAEKMVQYMTMDGTFGNPASRSHRYGWQAEEAVDTAREQIAELLNADPREIVFTSGATESDNLAIKGAAHFYSKQGKHVITSKTEHKAVLDTCRQLEREGFEVTYLEPESNGLI 132          

HSP 2 Score: 40.817 bits (94), Expect = 2.341e-44
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L +L AA+  DT L+S+M  NNEIGVIQ +E IG+
Sbjct:  134 LSKLEAAMRDDTVLVSIMHVNNEIGVIQDIEAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHEON (Cysteine desulfurase OS=Shewanella oneidensis GN=iscS PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.050e-44
Identity = 76/129 (58.91%), Postives = 102/129 (79.07%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M  +      +GNP SR+H +GW++E AV+ AR+Q+ADLI A  +EI+FTSGATESNN++IKGV HFYK K +H+IT++TEHK VLD+CR L++EGFE+TYL   ++GI+
Sbjct:    4 PIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDVARNQVADLINADHREIVFTSGATESNNLAIKGVAHFYKKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPESNGII 132          

HSP 2 Score: 35.4242 bits (80), Expect = 3.050e-44
Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 2
Query:  629 LRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L AA+  DT L+S+M  NNEIGVI  ++ IG+
Sbjct:  137 LEAAMRDDTILVSIMHVNNEIGVIHDIDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHESW (Cysteine desulfurase OS=Shewanella sp. (strain W3-18-1) GN=iscS PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.050e-44
Identity = 75/129 (58.14%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M  +      +GNP SR+H +GW++E AV+ AR+Q+ADLI A  +EI+FTSGATESNN++IKGV HFY  K +H+IT++TEHK VLD+CR L++EGFE+TYL   ++GI+
Sbjct:    4 PIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDIARNQVADLINADHREIVFTSGATESNNLAIKGVAHFYNKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPASNGII 132          

HSP 2 Score: 36.965 bits (84), Expect = 3.050e-44
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            ++ L AA+  DT L+S+M  NNEIGVI  ++ IG+
Sbjct:  134 MERLEAAMRDDTILVSIMHVNNEIGVIHDIDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_SHEPC (Cysteine desulfurase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=iscS PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.050e-44
Identity = 75/129 (58.14%), Postives = 101/129 (78.29%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVDPRV + M  +      +GNP SR+H +GW++E AV+ AR+Q+ADLI A  +EI+FTSGATESNN++IKGV HFY  K +H+IT++TEHK VLD+CR L++EGFE+TYL   ++GI+
Sbjct:    4 PIYLDYAATTPVDPRVAEKMFQYMTMDGIFGNPASRSHRYGWQAEEAVDIARNQVADLINADHREIVFTSGATESNNLAIKGVAHFYNKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLEPASNGII 132          

HSP 2 Score: 36.965 bits (84), Expect = 3.050e-44
Identity = 17/35 (48.57%), Postives = 25/35 (71.43%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            ++ L AA+  DT L+S+M  NNEIGVI  ++ IG+
Sbjct:  134 MERLEAAMRDDTILVSIMHVNNEIGVIHDIDAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_NEIG2 (Cysteine desulfurase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=iscS PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.050e-44
Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVD RV + M+P+    +GNP S +H FGW +E AVE AR+ IA LI A PKEI+FTSGATES+N++IKG  +FYK K +H+IT +TEHK VLD+ R L+++GFE+TYL V  +G++
Sbjct:    6 PVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFGWTAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKTEHKAVLDTMRELERQGFEVTYLGVQENGLI 132          

HSP 2 Score: 41.9726 bits (97), Expect = 3.050e-44
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L+EL+AAI  DT LIS+M  NNEIGV+Q +  IG+
Sbjct:  134 LEELKAAIRDDTILISIMWVNNEIGVVQNIPAIGE 168          
BLAST of EY693163 vs. ExPASy Swiss-Prot
Match: ISCS_NEIG1 (Cysteine desulfurase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=iscS PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.050e-44
Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = 3
Query:  237 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV 617
            P+YLD  ATTPVD RV + M+P+    +GNP S +H FGW +E AVE AR+ IA LI A PKEI+FTSGATES+N++IKG  +FYK K +H+IT +TEHK VLD+ R L+++GFE+TYL V  +G++
Sbjct:    6 PVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFGWTAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKTEHKAVLDTMRELERQGFEVTYLGVQENGLI 132          

HSP 2 Score: 41.9726 bits (97), Expect = 3.050e-44
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  620 LDELRAAIXPDTGLISVMGGNNEIGVIQPMEEIGQ 724
            L+EL+AAI  DT LIS+M  NNEIGV+Q +  IG+
Sbjct:  134 LEELKAAIRDDTILISIMWVNNEIGVVQNIPAIGE 168          
The following BLAST results are available for this feature:
BLAST of EY693163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 203
Match NameE-valueIdentityDescription
ISCS_SHEAM1.796e-4458.91Cysteine desulfurase OS=Shewanella amazonensis (st... [more]
ISCS_NEIMA1.796e-4457.48Cysteine desulfurase OS=Neisseria meningitidis ser... [more]
ISCS_VIBHB2.341e-4458.91Cysteine desulfurase OS=Vibrio harveyi (strain ATC... [more]
ISCS_VIBVY2.341e-4455.81Cysteine desulfurase OS=Vibrio vulnificus (strain ... [more]
ISCS_VIBVU2.341e-4455.81Cysteine desulfurase OS=Vibrio vulnificus GN=iscS ... [more]
ISCS_SHEON3.050e-4458.91Cysteine desulfurase OS=Shewanella oneidensis GN=i... [more]
ISCS_SHESW3.050e-4458.14Cysteine desulfurase OS=Shewanella sp. (strain W3-... [more]
ISCS_SHEPC3.050e-4458.14Cysteine desulfurase OS=Shewanella putrefaciens (s... [more]
ISCS_NEIG23.050e-4457.48Cysteine desulfurase OS=Neisseria gonorrhoeae (str... [more]
ISCS_NEIG13.050e-4457.48Cysteine desulfurase OS=Neisseria gonorrhoeae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-008-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693163 ID=EY693163; Name=EY693163; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGCGGACGCGTGGGTACGCAACGAAGCAAAGCAAAGAGAAA
AAGAAGCCGTTGAAAATGGCCTCTAAGCTAATAGCTTCAACTCTCCGCAA
AACCCTAACTAAGGCCGCCAAGACCGCCGGCGTCCGCTCCCTTTCCAACG
CCACAGCCGCCGCGGTTTCTACGGCGTATGAACCTCAGGAGGACCAAAAC
GGAATCACCTTGAAAGGCGTGAGAATCGCGGGCCGCCCTCTCTACCTCGA
TATGCAAGCAACCACTCCAGTCGACCCACGTGTCCTCGATGCCATGCTCC
CTTTCTATCTTTCTCGTTACGGTAACCCCCACTCCCGGACCCACCTCTTC
GGCTGGGAATCCGAAGTCGCCGTCGAAACCGCCCGCTCTCAAATCGCCGA
TCTTATCGGCGCTTCTCCTAAAGAGATAATTTTCACTTCCGGCGCAACGG
AATCGAATAATGTCTCCATCAAAGGAGTCATGCACTTTTACAAGGATAAA
AAGCGCCACGTCATCACCACTCAGACCGAGCACAAGTGCGTTCTCGATTC
GTGCCGGCATCTTCAGCAGGAAGGTTTTGAAATTACTTATTTACCTGTTG
GAGCTGATGGGATTGTTATTTAGATGAATTGCGAGCTGCTATTANGCCTG
ACACCGGCTTGATTTCTGTTATGGGCGGTAACAACGAAATTGGCGTGATT
CAGCCTATGGAAGAAATCGGCCAATTNGAAAAGATTTAAATCCCGTTTCC
ACTGATGCTGCCCAGGCGTGGGGAAGATTCGGNTGATGTCNAAAATGGAT
GTGAGTTGATGTCGTGAGTGGCATAGATTATGGGCCGAAAGGAGCGTGCT
TGNATATAGACGAGGCCAGAATCNAGNTGAACCTTAATAATGGAGGGGCC
AGAAAAAGGATAAGA
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