EY693082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 379.407 bits (973), Expect = 1.307e-111 Identity = 183/213 (85.92%), Postives = 197/213 (92.49%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MA STMALSSS F GKAV L+PS +E++ G+++MRKT SK+ VSS SPWYGP+RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK G+QIFS+GGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV DPLYPGGSFDPLGLA+DP AFAELKV Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKV 213 HSP 2 Score: 45.8246 bits (107), Expect = 1.307e-111 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 2.904e-111 Identity = 184/213 (86.38%), Postives = 198/213 (92.96%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MA +TMA+SSS F GKAVN+ PS ++++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDP AFAELKV Sbjct: 1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKV 212 HSP 2 Score: 45.8246 bits (107), Expect = 2.904e-111 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 378.252 bits (970), Expect = 2.905e-111 Identity = 189/218 (86.70%), Postives = 197/218 (90.37%), Query Frame = 2 Query: 56 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 A S+MALSS S GKAV L PS E+ GR+SMRKT +K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP AFAELKV E K G Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV--KELKNG 215 HSP 2 Score: 45.8246 bits (107), Expect = 2.905e-111 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 213 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 375.555 bits (963), Expect = 1.870e-110 Identity = 179/208 (86.06%), Postives = 190/208 (91.35%), Query Frame = 2 Query: 83 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 + G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP+YPGGSFDPLGLADDP AFAELKV E K G Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV--KELKNG 207 HSP 2 Score: 45.8246 bits (107), Expect = 1.870e-110 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 205 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 377.096 bits (967), Expect = 4.153e-110 Identity = 181/217 (83.41%), Postives = 198/217 (91.24%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSE 694 MA +TMALSSS F GK V L+PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW KAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLG V DPLYPGGSFDPLGLA+DP AFAELKV +++ Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETK 217 HSP 2 Score: 43.1282 bits (100), Expect = 4.153e-110 Identity = 23/42 (54.76%), Postives = 28/42 (66.67%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA 812 +NG++AM MFGFF QAIVTGKGP E L P +AW+ Sbjct: 217 KNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWS 258
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 375.555 bits (963), Expect = 4.153e-110 Identity = 181/213 (84.98%), Postives = 195/213 (91.55%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MA +TMALSSS F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYGPDRVKYLGPFSGE PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLA+DP AFAELKV Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKV 213 HSP 2 Score: 44.669 bits (104), Expect = 4.153e-110 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AW+ PGK Sbjct: 217 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 9.226e-110 Identity = 181/213 (84.98%), Postives = 196/213 (92.02%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MA +TMALSSS F GKAVN+ PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKAG+QIF EGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV DPLYPGGSFDPLGLADDP AFAEL+V Sbjct: 1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEV 212 HSP 2 Score: 45.8246 bits (107), Expect = 9.226e-110 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 216 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.446e-107 Identity = 183/214 (85.51%), Postives = 192/214 (89.72%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 MA+STMALSS+ F GKAVN+ S R++MRKT +K+ +SGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLADDP AF ELKV Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKV 211 HSP 2 Score: 42.743 bits (99), Expect = 1.446e-107 Identity = 25/51 (49.02%), Postives = 30/51 (58.82%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 + G++AM MFGFF QAIVTGKGP E + P +AWA PGK Sbjct: 215 KKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGK 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 365.54 bits (937), Expect = 1.886e-107 Identity = 183/222 (82.43%), Postives = 196/222 (88.29%), Query Frame = 2 Query: 53 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SSGSPWYGPDRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA+EGYR+AGGPLGEV DPLYPGG+FDPLGLADDP AFA++KV E K G Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKV--KELKNG 217 HSP 2 Score: 45.8246 bits (107), Expect = 1.886e-107 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 364.385 bits (934), Expect = 4.189e-107 Identity = 181/219 (82.65%), Postives = 192/219 (87.67%), Query Frame = 2 Query: 53 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 MA STMALSS + GKAV +APS +EL GR+SMRKT VS SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSIL+IWA QV+LMGAVEGYR+AGGPLGE+ DPLYPGGSFDPLGLA+DP AELKV E K G Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKV--KELKNG 216 HSP 2 Score: 45.8246 bits (107), Expect = 4.189e-107 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 214 KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 The following BLAST results are available for this feature:
BLAST of EY693082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693082 ID=EY693082; Name=EY693082; organism=Citrus sinensis; type=EST; length=907bpback to top |