EY693082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 2.634e-88 Identity = 163/210 (77.62%), Postives = 178/210 (84.76%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAF 667 MATST+ S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYR+ GGPLGE D LYPGG+FDPLGLA+DP AF Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.350e-78 Identity = 133/180 (73.89%), Postives = 151/180 (83.89%), Query Frame = 2 Query: 155 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP FAELKV Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKV 199 HSP 2 Score: 38.891 bits (89), Expect = 2.350e-78 Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXE 767 +NG++A MFGFF QAIVTGKGP + Sbjct: 203 KNGRLASFSMFGFFVQAIVTGKGPVQ 228
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.348e-77 Identity = 131/169 (77.51%), Postives = 143/169 (84.62%), Query Frame = 2 Query: 179 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN-GVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A QVVLMG +EGYR+ GGP GE DPLYPG SFDPLGLADDP FAELKV Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKV 202 HSP 2 Score: 38.891 bits (89), Expect = 3.348e-77 Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXE 767 +NG++AM FGFF QAIVTGKGP + Sbjct: 206 KNGRLAMFSCFGFFVQAIVTGKGPIQ 231
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 6.218e-76 Identity = 148/206 (71.84%), Postives = 158/206 (76.70%), Query Frame = 2 Query: 89 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKVXKSEWKGG 706 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAVEGYRIA GPLGEVTDPLYP GSFD LGLA+D AFAELKV E K G Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKV--KELKNG 220 HSP 2 Score: 31.5722 bits (70), Expect = 6.218e-76 Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXE 767 +NG++AM MFGFF QAIV+ K E Sbjct: 218 KNGRLAMFSMFGFFVQAIVSRKDRLE 243
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.507e-74 Identity = 135/212 (63.68%), Postives = 159/212 (75.00%), Query Frame = 2 Query: 56 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTDPLYPGGS-FDPLGLADDPGAFAELKV 682 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLADDP FAELKV Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPTTFAELKV 211 HSP 2 Score: 42.743 bits (99), Expect = 1.507e-74 Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAW 809 +NG++AM MFGFF QAIVTGKGP E L P +AW Sbjct: 215 KNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW 255
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 3.342e-74 Identity = 139/215 (64.65%), Postives = 161/215 (74.88%), Query Frame = 2 Query: 53 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGS-FDPLGLADDPGAFAELKV 682 MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G +GE D LYPGG FDPLGLADDP FAELKV Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLGLADDPVTFAELKV 214 HSP 2 Score: 42.743 bits (99), Expect = 3.342e-74 Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAW 809 +NG++AM MFGFF QAIVTGKGP E L P +AW Sbjct: 218 KNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAW 258
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.047e-66 Identity = 119/167 (71.26%), Postives = 136/167 (81.44%), Query Frame = 2 Query: 194 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLG--EVTDPLYPGGSFDPLGLADDPGAFAELKV 682 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A QVVLMG E YR GG G + D LYPGG FDPLGLADDP FAELKV Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKV 199 HSP 2 Score: 36.5798 bits (83), Expect = 1.047e-66 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXE 767 +NG++AM GFF QAIVTGKGP + Sbjct: 203 KNGRLAMFSCLGFFVQAIVTGKGPVQ 228
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.244e-64 Identity = 119/177 (67.23%), Postives = 135/177 (76.27%), Query Frame = 2 Query: 158 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+A +WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVVLMG VEGYR+ GGP GE DPLYPG +FDPLGLADDP FAELKV Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKV 220 HSP 2 Score: 38.5058 bits (88), Expect = 1.244e-64 Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXETXPT-LG*PCQIHAWA 812 +NG++AM GFF QAIVTGKGP E L P + +A+A Sbjct: 224 KNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFA 265
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.150e-50 Identity = 83/96 (86.46%), Postives = 88/96 (91.67%), Query Frame = 2 Query: 395 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLYPG +FDPLGLADDP A AELKV Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKV 96 HSP 2 Score: 45.0542 bits (105), Expect = 3.150e-50 Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXET-XPTLG*PCQIHAWA-THPLCPGK 836 +NG++AM MFGFF QAIVTGKGP E L P +AWA PGK Sbjct: 100 KNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150
BLAST of EY693082 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.388e-37 Identity = 88/180 (48.89%), Postives = 103/180 (57.22%), Query Frame = 2 Query: 167 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPGAFAELKV 682 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+G E YRI G + D L+PGG FDPLGLA DP A LKV Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNGL--DFEDKLHPGGPFDPLGLAKDPEQGALLKV 223 HSP 2 Score: 36.965 bits (84), Expect = 1.388e-37 Identity = 16/26 (61.54%), Postives = 20/26 (76.92%), Query Frame = 3 Query: 690 QNGKVAMXLMFGFFRQAIVTGKGPXE 767 +NG++AM M GFF QA VTG+GP E Sbjct: 227 KNGRLAMFAMLGFFIQAYVTGEGPVE 252 The following BLAST results are available for this feature:
BLAST of EY693082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693082 ID=EY693082; Name=EY693082; organism=Citrus sinensis; type=EST; length=907bpback to top |