EY693032

Overview
NameEY693032
Unique NameEY693032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            MA PVSAIGFEGYEKRLE++F E  +FADP GRGLR+LS        + A+CT+        FD ++ S++       + + +TCGTT
Sbjct:    1 MAAPVSAIGFEGYEKRLEITFSEASIFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSQKIVIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  508 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            M+  VSAIGFEG+EKRLE+SFFEP  FADP G+GLR LS     ++  PA+CT+         D ++ S++       + I +TCGTT
Sbjct:    1 MSSEVSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVDSYVLSESSLFVYAYKIIIKTCGTT 88          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLF-LRCQMNIFDHMSSQNQPLCVPLQSIYQTCGTT 768
            + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LS     +   PA+CT+       ++  ++ S++       + I +TCGTT
Sbjct:   25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAQLDEILGPAECTIVDSLANESVDSYVLSESSLFVYSYKIIIKTCGTT 110          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 1
Query:  523 SAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            SAIGFEG+EKRLE+SFF PG   DP  RGLRSL+     K+  PA+CT+      ++ D ++ S++     P + I +TCGTT
Sbjct:    3 SAIGFEGFEKRLEISFFNPGPSVDPVARGLRSLTKNQLDKFLAPAECTIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTT 85          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            + +SAIGFEGYEKRLEV+FFEPG+F D  G+GLR+L+     +   PA+CT+      +  D ++ S++     P + + +TCGTT
Sbjct:    1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCGTT 86          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            + VSAIGFEGYEKRLEVSFFEP +F D  G+GLR+L      +   PA+CT+      +  D ++ S++     P + I +TCGTT
Sbjct:    1 MSVSAIGFEGYEKRLEVSFFEPSLFVDTHGKGLRALPKSQIDEILAPAECTIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTT 86          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLR-CQMNIFDHMSSQNQPLCVPLQSIYQTCGTT 768
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+     +   PA+CT+       ++  ++ S++       + I +TCGTT
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKIIIKTCGTT 86          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query:  514 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLR-CQMNIFDHMSSQNQPLCVPLQSIYQTCGTT 768
            + VSAIGFEG+EKRLE+SF +PG+F+DP GRGLRSL+     +   PA+CT+       ++  ++ S++       + I +TCGTT
Sbjct:    1 MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANEDVDSYVLSESSLFVYAYKLIIKTCGTT 86          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  517 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            PVSAIGFEGYEKRLE++F E  VFADP GRGLR+LS        + A+CT+        FD ++ S++       + + +TCGTT
Sbjct:   11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTT 95          
BLAST of EY693032 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  517 PVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSNINWMKY*NPAKCTLFLRCQMNIFD-HMSSQNQPLCVPLQSIYQTCGTT 768
            PVSAIGFEGYEKRLE++F E  VFADP GRGLR+LS        + A+CT+        FD ++ S++       + + +TCGTT
Sbjct:   11 PVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDSYVLSESSLFIYSDKIVIKTCGTT 95          
The following BLAST results are available for this feature:
BLAST of EY693032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DCAM_HORCH2.119e-1346.59S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_DAUCA2.119e-1346.59S-adenosylmethionine decarboxylase proenzyme OS=Da... [more]
DCAM1_DIACA2.119e-1344.19S-adenosylmethionine decarboxylase proenzyme 1 OS=... [more]
DCAM_HELAN6.167e-1346.99S-adenosylmethionine decarboxylase proenzyme OS=He... [more]
DCAM2_ARATH6.167e-1344.19S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM2_BRAJU1.052e-1246.51S-adenosylmethionine decarboxylase proenzyme 2 OS=... [more]
DCAM_VICFA1.794e-1244.19S-adenosylmethionine decarboxylase proenzyme OS=Vi... [more]
DCAM_PEA1.794e-1244.19S-adenosylmethionine decarboxylase proenzyme OS=Pi... [more]
DCAM_ORYSJ3.060e-1247.06S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI3.060e-1247.06S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-007-A10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693032 ID=EY693032; Name=EY693032; organism=Citrus sinensis; type=EST; length=903bp
CCACGCGTCCGAGGAGATCGAAATTCGTTTTGTGAAACAGAGTGAAAAAT
CAACCCTTCTTTAATCCTCAAGGAATTTTATTATTTTCTTGGTCTCTGAA
TCGAGGGTTTTGCTTCTTGGTTTAGTGGGTTTGTTTTCGTTATATTATCT
GAGCAAGGCTGAATGATCTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCT
AGCAGTAGTTCCTTATTCTACGAAGCTCCTCTTGGTTACAGCATTGAAGA
CGTTCGACCTCACGGTGGCATAAAGAAGTTCAGATCAGCTGCATACTCAA
ACTGCGTCCGCAAACCATCCTGAGATCGTCCAATTTGTCCCATACCCCCC
CAAAAAAAAGCTCACTACTACTGCAATTTTAATTTTTTTTAGTTTTAGCC
GTCTTAATACTGCAATTTACTTGGCCTATTTCTTTTTCGACTTCCCTCGT
TCTCTCGTTCTGCCCTCTTTGCTCTTTGCAATTGTCATTTGTTTTCTGTA
AGGCAAGATGGCCTTGCCAGTCTCTGCAATTGGATTTGAAGGTTATGAAA
AGAGGCTTGAAGTTTCCTTTTTTGAGCCTGGTGTCTTTGCTGATCCTGGA
GGTAGGGGCCTCCGCTCTCTGTCAAACATCAATTGGATGAAATACTGAAA
CCCTGCGAAATGCACATTGTTTCTTCGTTGTCAAATGAACATCTTTGATC
ATATGTCCTCTCAGAATCAGCCTCTTTGTGTACCCTTACAAAGTATTTAT
CAAACTTGTGGGACTACCNAGCTGCTTCTTNNCATCCTGNCATNNCTCAG
TAGCTGAGTCCCCTCTCGTGTCTGTCGATCTGTGAGATACACTCTGGAAG
CTTCTATTTGCTGGGCTCAGCCATCCACACCGTACTCTCTGAGGAGAACT
GTC
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