EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.001e-68 Identity = 124/181 (68.51%), Postives = 144/181 (79.56%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASSM+S+A VA NRAS QASMVAPFTGLKS+SAFP T+KT DITSIASNGGR QCM+VWPP G K ETLSYLPPL+ E L KE+ YL+R GW+PCLEFELE G V RE+H+SPGYYDGRYWTMWKLPM+GCTDA Q L+++ E YP + RII DN RQVQ ++F+A +P G Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 1.308e-68 Identity = 127/181 (70.17%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS+ISSA VAT R+++ QASMVAPFTGLKSS+ FP TKK N DITSIASNGGR CM+VWPP +KK ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP ++VRII DN RQVQ ++FIA +P G Sbjct: 1 MASSVISSAAVAT--RSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.708e-68 Identity = 126/180 (70.00%), Postives = 143/180 (79.44%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSMISS V T NRA G VAPFTGLKS + FP T+KTNNDI SIASNGGR QCM+VWP TG KK ETLSYLP L D L KE+ YL+R GWIPCLEFELE G+V REHH+SPGYYDGRYWTMWKLPM+GCTDA+Q LK++ EA YP++F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMISSPAVTTVNRAGAGT---VAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.913e-68 Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R+++ QA+MVAPFTGLKS+++FP ++K N DITSIASNGGR QCM+VWPP KK ETLSYLP LS E LL EI YL++SGW+PCLEFE E+G+V REHH SPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP ++VRII DN RQVQ ++FIA +P G Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 6.491e-68 Identity = 121/181 (66.85%), Postives = 147/181 (81.22%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASSMISSAT+AT N +S QA+MVAPFTGLKS+SAFP T+K NNDITS+ASNGGR QCM+VWPP G KK ETLSYLP L+ L KE++YL+RS WIPCLEFELE+G+V R++ P YYDGRYWTMWKLPM+GCTD+ Q L+++ EYP++F+RII DN RQVQ ++FIA +P G Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSASAFPVTRKANNDITSLASNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 6.491e-68 Identity = 124/180 (68.89%), Postives = 144/180 (80.00%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSA V T S QA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGR CMKVWPP G KK ETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP +F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2) HSP 1 Score: 257.684 bits (657), Expect = 6.491e-68 Identity = 123/180 (68.33%), Postives = 145/180 (80.56%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSAT+ AS QA+MVAPF GLKSS+AFPAT+K NNDITSI SNGGR CM+VWPP G KK ETLSYLP L+D L KE++YLIR+ WIPC+EFELE G+V REH SPGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP++F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSATMV----ASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 8.477e-68 Identity = 124/181 (68.51%), Postives = 147/181 (81.22%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R + QASMVAPFTGLKS+++FP ++K N DITSIASNGGR CM+VWPP +KK ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+V RE+HKSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP ++VRII DN RQVQ ++FIA +P G Sbjct: 1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.446e-67 Identity = 124/181 (68.51%), Postives = 147/181 (81.22%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R + QASMVAPFTGLKS+++FP ++K N DITSIASNGGR CM+VWPP +KK ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+V RE+HKSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP ++VRII DN RQVQ ++FIA +P G Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.446e-67 Identity = 123/181 (67.96%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT+ A+ QASMVAPFTGLKS+++FP ++K N DITSIASNGGR QCM+VWPP G KK ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+V RE+H SP YYDGRYWTMWKLPM+GCTDATQ L ++ EA YP++++RII DN RQVQ ++FIA +PPG Sbjct: 1 MASSVMSSAAVATSTNAA--QASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |