EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67 Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSA V T+ QA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGR CMKVWPP G KK ETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP++ +RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSAAVVTSQL----QATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67 Identity = 122/181 (67.40%), Postives = 149/181 (82.32%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT RA+ QASMV PFTGLKS+++FP ++K N DITSIASNGGR +CM+VWPP +KK ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67 Identity = 122/180 (67.78%), Postives = 145/180 (80.56%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSA V T S QA+MVAPFTGLKSS+AFP T+K NNDITSIASNGGR CMKVWPP G KK ETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP++F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.888e-67 Identity = 123/182 (67.58%), Postives = 150/182 (82.42%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA AT R+++ QASMVAPFTGLKS+++FP TKK NN DITS+ASNGGR +CM+VWPP +KK ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+V RE++ SPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP ++VRII DN RQVQ ++FIA +P G Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.466e-67 Identity = 125/180 (69.44%), Postives = 142/180 (78.89%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSMISS V T NRA G MVAPFTGLKS + P T+KTNNDITSIASNGGR QCM+VWPP G KK ETLSYLP L D L KE+ YL+R GWIPCLEFELE G+V REH++S GYYDGRYWTMWKLPM+GCTDA+Q LK++ EA YP+ F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMISSPAVTTVNRAGAG---MVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 2.466e-67 Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSA V T S QA+MVAPFTGLKSSSAFP T+K NNDITSI SNGGR CMKVWPP G KK ETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP++F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67 Identity = 122/181 (67.40%), Postives = 149/181 (82.32%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R + QASMVAPFTGLKS+++FP ++K N DITSIASNGGR +CM+VWPP +KK ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.221e-67 Identity = 122/181 (67.40%), Postives = 149/181 (82.32%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R + QASMVAPFTGLKS+++FP ++K N DITSIASNGGR +CM+VWPP +KK ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.207e-67 Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSMISS V T NRA G VAPFTGLKS + FP T+KTNNDI SIASNGGR QCM+VWP TG KK ETLSYLP L D L KE+ YL+R GWIPCLEFELE G+V RE+H+SPGYYDGRYWTMWKLP++GCTDA+Q LK++ EA YP+ F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMISSPAVTTVNRAGAGT---VAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_CUCSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.495e-67 Identity = 114/179 (63.69%), Postives = 149/179 (83.24%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASS++SSA VA+ N AS QASMVAPFTGLKSS+ FP T+K N DIT++ASN G+ QCMKVWPP GL+K ETLSYLP +S+E L KE +YL+R+GW+PC+EF++ G+V RE+H+SPG+YDGRYWTMWKLPM+GCTD++Q ++++ EA EYP +F+R+I DN RQVQ ++FIA +P Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKP 179 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |