EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 7.176e-67 Identity = 123/181 (67.96%), Postives = 145/181 (80.11%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS+ISSA VAT R ++ QASMVAPF GLKS+ +FP + K N DITSIASNGGR QCM+VWPP G KK ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+V RE+H SP YYDGRYWTMWKLPM+GCTDATQ L ++ EA YP++++RII DN RQVQ ++FIA +PPG Sbjct: 1 MASSVISSAAVAT--RTNVAQASMVAPFNGLKSAVSFPVSSKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 7.176e-67 Identity = 121/180 (67.22%), Postives = 143/180 (79.44%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM+SSA V T S QA+MVAPFTGLKSS++FP T+K NNDITSI SNGGR CMKVWPP G KK ETLSYLP L+D L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP +F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.599e-66 Identity = 121/180 (67.22%), Postives = 141/180 (78.33%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 MASSM SS V T S QA+MVAPFTGLKSS++FP T+K NNDITSI SNGGR CMKVWPP G KK ETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+V REH +PGYYDGRYWTMWKLP++GCTD+ Q LK+V E EYP +F+RII DN RQVQ ++FIA +PP Sbjct: 1 MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_TOBAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana tabacum GN=RBCS PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66 Identity = 120/181 (66.30%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R+++ QA+MVAPFTGLKS+++FP ++K N DITSIASNGGR QCM+VWPP KK ETLSYLP LS E LL E+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_SOLTU (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum tuberosum GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66 Identity = 121/182 (66.48%), Postives = 148/182 (81.32%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQA-SMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS+ISSA VAT R ++ QA SM+APFTGLKS++ FP ++K N DITSIASNGGR +CM+VWPP +KK ETLSYLP L+DE LLKE+ YL+++GW+PCLEFE E G+V RE+HKSPGYYDGRYWTMWKLPM+GCTDATQ L +V E YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSVISSAAVAT--RTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66 Identity = 120/181 (66.30%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT R+++ QA+MVAPFTGLKS+++FP ++K N DITSIASNGGR QCM+VWPP KK ETLSYLP LS E LL E+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 2.088e-66 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASSM+SSA VAT NR QASMVAPF GLKS +AFP TKK NNDITS+A+NGGR QCM+VWPP G KK ETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+V REH +PGYYDGRYWTMWKLPM+GCTD +Q + ++ EA YP +F+RII DN RQVQ ++FIA +P Sbjct: 1 MASSMVSSAAVATVNRTP-AQASMVAPFNGLKSVAAFPVTKK-NNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.075e-66 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASS++S+ATVAT A+ QASM+A F GLKS+++FP T+K + DITSIASNGGR +CM VWPP KK ETLSYLP LSDE LLKEI YL++ GW+PCLEFE E G+V REHH+SPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P Sbjct: 1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 6.075e-66 Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASSM+S+A +AT + QASMVAPF GLKS + FP TKK++ND +S+ SNGGR QCM+VWPP G KK ETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +V RE+H+SPGY DGRYWTMWKLPMYGCTD Q L +V EA YP +F+RII DNKRQVQ V+FIA +P G Sbjct: 1 MASSMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKPAG 181
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 7.934e-66 Identity = 117/181 (64.64%), Postives = 148/181 (81.77%), Query Frame = 2 Query: 38 MASSMISSATVAT--ANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASSM+S+A VAT A+R++ QASMVAPFTGLKS SAFP T+K++ND++++ SNGG+ QCM+VWPP G KK ETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+V REH +PGYYDGRYWTMWKLPM+GCTD +Q + ++ EA YP +F+RII DN RQVQ V+FIA +P Sbjct: 1 MASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |