EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.015e-65 Identity = 120/179 (67.04%), Postives = 144/179 (80.45%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASS++SSA VAT R++ QASMVAPFTGLKS+++FP ++KTN DITSIASNGGR +CM+VWPP +KK ETLSYLP LS E LL EI YL+++GW+PCLEFE E G+V REH SPGYYDGRYWTMWKLPM+GCTDATQ +V EA YP + +RII DN RQVQ ++FIA +P Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.015e-65 Identity = 121/181 (66.85%), Postives = 143/181 (79.01%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++S+A A AS QA+MVAPF GLKS ++FP T+K+N DITSIASNGGR QCM+VWPP G KK ETLSYLPPLSD LL ++ YL+ +GWIPC+EFELE +V RE+H+SPGY DGRYWTMWKLPMYGCTD Q L +V EA YP +F+RII DNKRQVQ V+FIA +PPG Sbjct: 1 MASSLMSNAITAVVG-ASGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 3.015e-65 Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 2 Query: 44 SSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 +SMISS+ V T +RAS GQ++ VAPF GLKS + FP KK N DITSI SNGGR +CM+VWPP G KK ETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+V REH+KSPGYYDGRYWTMWKLPM+G TDA+Q LK++ E YP +FVRII DN RQVQ ++FIA P Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.938e-65 Identity = 120/181 (66.30%), Postives = 144/181 (79.56%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 ++S M+SSA AT RAS Q+SMVAPFTGLKS+SAFP T+K N D++ + SNGGR QCMKVWP G+KK ETLSYLP + DEAL+K+I YL+RS WIPCLEF KG+V RE+H+SPGYYDGRYWTMWKLPM+GCTDA Q K+V E EYPH+F+RII DN RQVQ ++FIA +P G Sbjct: 2 VSSMMVSSA--ATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQVQCISFIAYKPTG 179
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.143e-65 Identity = 116/176 (65.91%), Postives = 141/176 (80.11%), Query Frame = 2 Query: 47 SMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 ++ISSA V T NRA + QA++ PFTGLKSS+ FP TKK NNDITSI SNG R CM+VWPP G KK ETLSYLPPL+DE LLKE+ YL+R GW+PC+EFELEKG+V R+++ SPGYYDGRYWTMW+LP++G TDA Q LK+V E EYP +F+RII DN RQVQ ++FIA+ P Sbjct: 2 ALISSAAVTTINRAPV-QANLATPFTGLKSSAGFPVTKK-NNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTP 175
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.143e-65 Identity = 116/179 (64.80%), Postives = 142/179 (79.33%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASS++S+A A + QA+MVAPF GLKS SAFP T+K NNDITS+ASNGGR QCM+VWPP G+KK ETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+V REH +PGYYDGRYWTMWKLPM+GCTD +Q + ++ EA YP +F+RII DN RQVQ V+FIA +P Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64 Identity = 116/177 (65.54%), Postives = 143/177 (80.79%), Query Frame = 2 Query: 50 MISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 M S+A VAT A+ QASM+APFTGLKS+++FP ++K N DITSIASNGGR QCM+VWPP KK ETLSYLP LS+E LL+E+ YL+++GW+PCLEFE E G+V RE++KSPGYYDGRYWTMWKLPM+GCTDATQ L +V EA YP +++RII DN RQVQ ++FIA +P G Sbjct: 6 MSSAAAVATGTNAA--QASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.954e-64 Identity = 121/181 (66.85%), Postives = 142/181 (78.45%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLG--QASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 MASSM+S+A A A A+ G QA+MVAPF GLKS ++FP T+K+N DITSIASNGGR QCM+VWPP G KK ETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +V RE+H+SPGY DGRYWTMWKLPMYGCTD Q L +V EA YP +F+RII DNKRQVQ V+FIA +P Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.552e-64 Identity = 118/177 (66.67%), Postives = 140/177 (79.10%), Query Frame = 2 Query: 44 SSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGR +CM+VWPP G KK ETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+V REH+KSPGYYDGRYWTMWKLPM+G TDA+Q LK++ E YP +FVRII DN RQVQ ++FIA P Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.552e-64 Identity = 116/181 (64.09%), Postives = 144/181 (79.56%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASS++SSA VAT +R QASMVAPFTGLKS+ FPATKK N+DITS+ASNGGR QCMKVWP +K+ ETLSYLPPL+ + L ++++YL+ + W+PCLEFE + G+V REHH SPGYYDGRYWTMWKLPM+GCTD Q L ++ E EYP++F+RII D+ RQVQ V+FIA +P G Sbjct: 1 MASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |