EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_FLATR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Flaveria trinervia GN=RBCS PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.602e-58 Identity = 104/168 (61.90%), Postives = 133/168 (79.17%), Query Frame = 2 Query: 77 ANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A A++ Q +MVAPFTGLK+++AFP TKK N +++ SNGGR QCMKVWPP G KK ETLSYLP L++ L KE++YL+R+ W+PCLEFELE G+V RE+ SPGYYDGRYWTMWKLPM+GCTD+ Q +K++ E EYP +++RII DN RQVQ V+FIA++P G Sbjct: 6 ATVAAVPQTNMVAPFTGLKANAAFPVTKKVNG-FSTLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS6_FLAPR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Flaveria pringlei GN=RBCS6 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.602e-58 Identity = 103/166 (62.05%), Postives = 134/166 (80.72%), Query Frame = 2 Query: 77 ANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 A A++ QA+MVAPFTGLK+++AFP TKK N D +++ SNGGR QCMKVWPP G KK TLSYLP L++ L KE++YL+R+ W+PCLEFELE G+V RE+ +SPGYYDGRYWTMWKLPM+GCTD+ Q +K++ E EYP +++RII DN RQVQ ++FIA++P Sbjct: 6 ATVAAVAQANMVAPFTGLKANAAFPVTKKVN-DFSTLPSNGGRVQCMKVWPPLGKKKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKP 170
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_LEMGI (Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic OS=Lemna gibba GN=SSU1 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 7.953e-58 Identity = 107/175 (61.14%), Postives = 134/175 (76.57%), Query Frame = 2 Query: 50 MISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 M+S+A VA A Q +MV F G +SS AFPAT+K NND++++ S+GGR CM+VWPP GLKK ETLSYLPPLS E L KE++YL+R+ W+PC+EF E G+V RE++ SPGYYDGRYWTMWKLPM+GCTDA+Q + +V EA YP FVRII DNKRQVQ ++FIA +P Sbjct: 2 MVSTAAVARVRPA---QTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 172
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.721e-56 Identity = 102/160 (63.75%), Postives = 127/160 (79.38%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P ++++N S+ SNGGR +CM+VWP G+KK ETLSYLPPLS EALLK+++YLIRS W+PCLEF + G++ REH+ SPGYYDGRYWTMWKLPM+GCTDATQ L +V E EYP ++VRII DN RQVQ V+FIA +PPG Sbjct: 10 ATSVAPFQGLKSTAGLPVSRRSNASSASV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 167
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.694e-55 Identity = 101/160 (63.12%), Postives = 125/160 (78.12%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P + ++ + S SNGGR +CM+VWP G+KK ETLSYLPPLS EALLK+++YLIRS W+PCLEF + G+V REH+ SPGYYDGRYWTMWKLPM+GCTDATQ L +V E EYP ++VR+I DN RQVQ V+FIA +PPG Sbjct: 10 ATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPG 168
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_WHEAT (Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 8.230e-55 Identity = 100/160 (62.50%), Postives = 126/160 (78.75%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P ++++ + S+ SNGGR +CM+VWP G+KK ETLSYLPPLS EAL K+++YLIRS W+PCLEF + G+V REH+ SPGYYDGRYWTMWKLPM+GCTDATQ L +V E EYP ++VR+I DN RQVQ V+FIA +PPG Sbjct: 10 ATTVAPFQGLKSTAGLPVSRRSRGSLGSV-SNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFS-KVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRPPG 167
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.230e-55 Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P +++ N SNGGR +CM+VWP G+KK ETLSYLPPL+ E LLK+I YL+RS W+PCLEF + G+V RE+H+SPGYYDGRYWTMWKLPM+GCTDATQ LK++ EA YP +FVRII DN RQVQ ++FIA +PPG Sbjct: 10 ATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 214.157 bits (544), Expect = 8.230e-55 Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P +++ N SNGGR +CM+VWP G+KK ETLSYLPPL+ E LLK+I YL+RS W+PCLEF + G+V RE+H+SPGYYDGRYWTMWKLPM+GCTDATQ LK++ EA YP +FVRII DN RQVQ ++FIA +PPG Sbjct: 10 ATTVAPFQGLKSTAGMPVARRSGNSSFGNVSNGGRIRCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.075e-54 Identity = 100/160 (62.50%), Postives = 125/160 (78.12%), Query Frame = 2 Query: 101 ASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 A+ VAPF GLKS++ P ++++ N SNGGR +CM+VWP G+KK ETLSYLPPL+ E LLK+I YL+RS W+PCLEF + G+V RE+H+SPGYYDGRYWTMWKLPM+GCTDATQ LK++ EA YP +FVRII DN RQVQ ++FIA +PPG Sbjct: 10 ATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_ZANAE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.833e-54 Identity = 106/181 (58.56%), Postives = 133/181 (73.48%), Query Frame = 2 Query: 38 MASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPPG 580 MASSM+ S A +R S Q++MV PF GL SS+AFP T+K D + + SNG R +CM+VWPP G KK ETLSYLPPL+ E L +E++YLIR+GWIPC+EF + G+V RE+H SPGYYDGRYWTMWKLPM+GCTD++Q LK+V E YP F RII DN RQVQ ++F+ +P G Sbjct: 1 MASSMMVST--AAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFA-DSSKLPSNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEF-CKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKPEG 177 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |