EY693017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 29 AEPMASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEF-ELEKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 A +A S +S+A A S V P LK PA K +A+ +Q M VW P K ET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D Q L+++ +P ++VR++A DN++QVQ + F+ +P Sbjct: 2 AAVIAKSSVSAAVARPAR-------SSVRPMAALK-----PAVKAA-----PVAAPAQANQMM-VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29 Identity = 74/188 (39.36%), Postives = 104/188 (55.32%), Query Frame = 2 Query: 29 AEPMASSMISSATVATANRASLGQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEF-ELEKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 A +A S +S+A A S V P LK PA K +A+ +Q M VW P K ET SYLPPL+DE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D Q L+++ +P ++VR++A DN++QVQ + F+ +P Sbjct: 2 AAVIAKSSVSAAVARPAR-------SSVRPMAALK-----PAVKAA-----PVAAPAQANQMM-VWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 56/129 (43.41%), Postives = 82/129 (63.57%), Query Frame = 2 Query: 206 DQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFE------LEKGWVDREHHKSPGYYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQP 574 D KVW P K+ ET SYLPPL+++ + ++++Y+I +GW PCLEF + R S GYYD RYWTMWKLPM+GCTD +Q L++V +P+ ++R++A DN +QVQ + F+ +P Sbjct: 26 DARFKVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 61/152 (40.13%), Postives = 86/152 (56.58%), Query Frame = 2 Query: 146 FPATKKTNNDITSIASNGGRDQC--MKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 FP K N ASN +C M VW P K ET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L ++ +P +++R++ D RQVQ F+ +PP Sbjct: 22 FPRATKNNK---GFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS4_ACEAT (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia acetabulum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.260e-27 Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 2 Query: 140 SAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 +A P + S +N R+ M VW P K ET S+LPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L ++ N +P +++R++ D RQVQ F+ +PP Sbjct: 20 AATPKVVTSKRSFASTVANKNRE--MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 60/157 (38.22%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 125 GLKSSSAFPATKKTNNDITSIASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 G SA P + A N R+ M VW P K ET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L ++ +P +++R++ D RQVQ F+ +PP Sbjct: 15 GCTKPSAVPKVSINRKGFLNTAMNKKRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 2 Query: 203 RDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 +D+ M VW P K ET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L D+ +P +++R++ D RQVQ F+ +PP Sbjct: 40 KDRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPP 170
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26 Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 2 Query: 86 ASLGQASMVAPFTGLKSSSAFPATKKTNNDITS-IASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 A++ ++V G SS+ P S +A R+ M VW P K ET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L ++ +P +++R++ D RQVQ F+ +PP Sbjct: 3 AAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMKKSRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS5_ACEAT (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia acetabulum GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 2 Query: 188 ASNGGRDQCMKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 A N RD M VW P K ET S+LPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD +Q L ++ N +P +++R++ D RQVQ F+ +PP Sbjct: 37 AVNKNRD--MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of EY693017 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.048e-25 Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 215 MKVWPPTGLKKIETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVDREHHKSPG-----YYDGRYWTMWKLPMYGCTDATQGLKDVGEAHNEYPHSFVRIIASDNKRQVQSVTFIAAQPP 577 M VW P K ET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ + G Y D RYWTMWKLPM+GCTD +Q L ++ +P +++R++ D RQVQ F+ +PP Sbjct: 43 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169 The following BLAST results are available for this feature:
BLAST of EY693017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY693017 ID=EY693017; Name=EY693017; organism=Citrus sinensis; type=EST; length=886bpback to top |