EY693005

Overview
NameEY693005
Unique NameEY693005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC2_MELGA (Voltage-dependent anion-selective channel protein 2 OS=Meleagris gallopavo GN=VDAC2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.938e-12
Identity = 63/243 (25.93%), Postives = 105/243 (43.21%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALL 751
            P  Y D+GK ARD+  K Y     K  + T S +GV  T+SG+   +    + + + K K     +T   K +T + L T I + D+ A GLK  L+F         ++SGK++  Y  +   +   V    A P ++ SAV G      G  ++FDS     T+ N  + +   D     N+N+ G     S Y  V+        +  +  +      +  ++ LD   +  A+VN  +L+
Sbjct:    3 PPSYADLGKSARDIFNKGYGFGLVKLDVKTKSASGVEFTTSGSSNTDTGKVNGSLETKYKWAEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLK--LTFDTTFSPNTGKKSGKIKSAYKRECLNLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFSVGYKTGDFQLHTNVND-GSEFGGSIYQKVSDNLETAVNLAWTAGSNSTRFGIAAKYKLDSTASISAKVNNSSLV 242          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC3_PIG (Voltage-dependent anion-selective channel protein 3 OS=Sus scrofa GN=VDAC3 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 65/248 (26.21%), Postives = 114/248 (45.97%), Query Frame = 2
Query:   68 YTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITVDEP-APGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            Y D+GK A+D+  K Y     K  + T S +GV  ++SG    +   A  N + K K     +T   K +T + L T I+++   A GLK T+ +  VP+  ++SGK++  Y  +   I ++V +  A P +   AV+       G  +SFD+     ++ N  L +  AD     ++N+ G     S Y  VN        +  +  + +    +  ++ LD  T+  A+VN  +L+ L  + +  P
Sbjct:    7 YCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFSTSGHAYTDTGKASGNLETKYKICDHGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRECFSIGSNVDIDFAGPTIYGWAVLALEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRP 253          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC3_HUMAN (Voltage-dependent anion-selective channel protein 3 OS=Homo sapiens GN=VDAC3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 64/248 (25.81%), Postives = 114/248 (45.97%), Query Frame = 2
Query:   68 YTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLK----NKNITTDLKVDTASNLFTTITVDEP-APGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            Y D+GK A+D+  K Y     K  + T S +GV  ++SG    +   A  N + K    N  +T   K +T + L T I+ +   A GLK T+ +  VP+  ++SGK++  Y  D   + ++V +  + P +   AV+       G  +SFD+     ++ N  L +  AD     ++N+ G     S Y  VN        +  +  + +    +  +++LD  T+  A+VN  +L+ L  + +  P
Sbjct:    7 YCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVEFSTSGHAYTDTGKASGNLETKYKVCNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLRP 253          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC1_RAT (Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus GN=Vdac1 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 65/253 (25.69%), Postives = 110/253 (43.48%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSD-HKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK------NITTDLKVDTASNLFTTITV-DEPAPGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGL-TANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            P  Y D+GK ARD+  K Y     K  + T S  G+  TSSG+   E     VN  L+ K       +T   K +T + L T ITV D+ A GLK T  S   P+  +++ K++  Y  ++  +   V    A P +  + V+G      G  ++F++     T+ N  + +   +     N+N+ G     S Y  VN        +  +   ++    +  ++ +DP     A+VN  +L+ L  + +  P
Sbjct:    4 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTE--TTKVNGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKP 253          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC1_MOUSE (Voltage-dependent anion-selective channel protein 1 OS=Mus musculus GN=Vdac1 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.180e-11
Identity = 65/253 (25.69%), Postives = 110/253 (43.48%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSD-HKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK------NITTDLKVDTASNLFTTITV-DEPAPGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGL-TANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            P  Y D+GK ARD+  K Y     K  + T S  G+  TSSG+   E     VN  L+ K       +T   K +T + L T ITV D+ A GLK T  S   P+  +++ K++  Y  ++  +   V    A P +  + V+G      G  ++F++     T+ N  + +   +     N+N+ G     S Y  VN        +  +   ++    +  ++ +DP     A+VN  +L+ L  + +  P
Sbjct:   17 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTE--TTKVNGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKP 266          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC3_RABIT (Voltage-dependent anion-selective channel protein 3 OS=Oryctolagus cuniculus GN=VDAC3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 64/248 (25.81%), Postives = 114/248 (45.97%), Query Frame = 2
Query:   68 YTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLK----NKNITTDLKVDTASNLFTTITVDEP-APGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            Y D+GK A+D+  K Y     K  + T S +GV  ++SG    +   A  N + K    N  +T   K +T + L T I+++   A GLK T+ +  VP+  ++SGK++  Y  D   + ++V +  + P +   AV+       G  +SFD+     ++ N  L +  AD     ++N+ G     S Y  VN        +  +  + +    +  ++ LD  T+  A+VN  +L+ L  + +  P
Sbjct:    7 YCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFSTSGHAYTDTGKASGNLETKYKVCNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRP 253          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC3_PONAB (Voltage-dependent anion-selective channel protein 3 OS=Pongo abelii GN=VDAC3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 61/252 (24.21%), Postives = 115/252 (45.63%), Query Frame = 2
Query:   68 YTDIGKKARDLLYKDY---------QSDHKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEP-APGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            Y D+GK A+D+  K Y         ++     +  +S +G A T +G   G L   +   +++N  +T   K +T + L T I+ +   A GLK T+ +  VP+  ++SGK++  Y  D   + ++V +  + P +   AV+       G  +SFD+     ++ N  L +  AD     ++N+ G     S Y  VN        +  +  + +    +  +++LD  T+  A+VN  +L+ L  + +  P
Sbjct:    7 YCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVMEFSTSGHAYTDTGKASGNL---ETKYKVRNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFSVGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVND-GTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYMLDCRTSLSAKVNNASLIGLGYTQTLRP 254          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC2_RAT (Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus GN=Vdac2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 63/243 (25.93%), Postives = 102/243 (41.98%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALL 751
            P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K     +T   K +T + L T I + D+   GLK  L+F         ++SGK++  Y  +   +   V    A P ++ SAV G      G  ++FDS     T+ N  + +   D     N+NN G     S Y  V         +  +  T      +  ++ LDP  +  A+VN  +L+
Sbjct:   16 PPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLK--LTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTNVNN-GTEFGGSIYQKVCEDFDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLI 255          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC2_MOUSE (Voltage-dependent anion-selective channel protein 2 OS=Mus musculus GN=Vdac2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.460e-11
Identity = 63/243 (25.93%), Postives = 102/243 (41.98%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALL 751
            P  Y D+GK ARD+  K +     K  + T S +GV  ++SG+   +        + K K     +T   K +T + L T I + D+   GLK  L+F         ++SGK++  Y  +   +   V    A P ++ SAV G      G  ++FDS     T+ N  + +   D     N+NN G     S Y  V         +  +  T      +  ++ LDP  +  A+VN  +L+
Sbjct:   16 PPPYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVSGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLK--LTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTNVNN-GTEFGGSIYQKVCEDFDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLI 255          
BLAST of EY693005 vs. ExPASy Swiss-Prot
Match: VDAC1_PIG (Voltage-dependent anion-selective channel protein 1 OS=Sus scrofa GN=VDAC1 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 62/251 (24.70%), Postives = 109/251 (43.43%), Query Frame = 2
Query:   59 PGLYTDIGKKARDLLYKDYQSD-HKFTITTYSPTGVAITSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITV-DEPAPGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGL-TANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTXEARVNMLALLVLSISMSGGP 781
            P  Y D+GK ARD+  K Y     K  + T S  G+  TSSG+   E      + + K +     +T   K +T + L T ITV D+ A GLK T  S   P+  +++ K++  Y  ++  +   V    A P +  + V+G      G  ++F++     T+ N  + +   +     N+N+ G     S Y  VN        +  +   ++    +  ++ +DP     A+VN  +L+ L  + +  P
Sbjct:    4 PPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKNAKIKTGYKREHVNLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVND-GTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYTQTLKP 253          
The following BLAST results are available for this feature:
BLAST of EY693005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
VDAC2_MELGA4.938e-1225.93Voltage-dependent anion-selective channel protein ... [more]
VDAC3_PIG4.180e-1126.21Voltage-dependent anion-selective channel protein ... [more]
VDAC3_HUMAN4.180e-1125.81Voltage-dependent anion-selective channel protein ... [more]
VDAC1_RAT4.180e-1125.69Voltage-dependent anion-selective channel protein ... [more]
VDAC1_MOUSE4.180e-1125.69Voltage-dependent anion-selective channel protein ... [more]
VDAC3_RABIT5.460e-1125.81Voltage-dependent anion-selective channel protein ... [more]
VDAC3_PONAB5.460e-1124.21Voltage-dependent anion-selective channel protein ... [more]
VDAC2_RAT5.460e-1125.93Voltage-dependent anion-selective channel protein ... [more]
VDAC2_MOUSE5.460e-1125.93Voltage-dependent anion-selective channel protein ... [more]
VDAC1_PIG9.313e-1124.70Voltage-dependent anion-selective channel protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-G06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY693005 ID=EY693005; Name=EY693005; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGTCATTCTCCACGGAGAAAAAAAAAAAATTCAATCATGG
GCAAGGGTCCTGGTCTCTACACTGATATTGGCAAAAAAGCCAGAGATCTT
TTGTACAAGGATTATCAGAGCGACCACAAGTTCACTATCACTACCTACTC
TCCGACTGGAGTTGCTATTACATCATCTGGAACGAAAAAGGGTGAGCTGT
TTCTAGCTGATGTTAATACCCAGCTGAAGAACAAGAATATCACAACTGAT
CTCAAAGTGGACACTGCCTCCAATCTTTTCACAACTATCACTGTTGATGA
ACCTGCTCCTGGGCTGAAAACGATCCTAAGCTTCAAAGTTCCAGATCAAA
GGTCTGGCAAGGTTGAACTCCAGTATTTGCATGATTATGCGGGGATAAGC
ACAAGTGTCGGCTTAACAGCGAATCCTATTGTTAACTTCTCGGCTGTGAT
TGGTACTAATGTTCTCTCTCTTGGTACTGATCTGTCATTTGACTCCAAAT
CTGGGAACTTCACTAAATGCAATGCTGGTCTGAGCTTCAACAATGCCGAC
CTTATTGCTTCATTGAATTTGAACAACAAAGGTGATTCCCTGGCTGCATC
CTACTACCACTTTGTTAATCCCTTGACAGCTGTTGGTGCAGAAGTAATCC
ATAGCTTCTCAACCACTGACAATACCATCACTGTTGGGACCCAGCACATA
TTAGATCCACTGACCACATTNGAGGCGCGAGTGAACATGCTGGCATTGCT
AGTGCTCTCCATCAGCATGAGTGGCGGTCCCAAGTCGTGTTCACCATTTC
TGGTGAGGTGGACACCAAGGCATTGAGAAGAGTGCAANTTTTGACTGGCA
TTGGCTCTAAAGCCATANTGAAAGCT
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