EY692975

Overview
NameEY692975
Unique NameEY692975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METVA (30S ribosomal protein S8P OS=Methanococcus vannielii GN=rps8p PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.949e-24
Identity = 52/124 (41.94%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V+L G++NKCG + PR+ V  +E E +  R LP++ FG ++++T  G+M H+EAR    GG+++ + Y
Sbjct:    7 LANALNHVSNCEGVGKNVAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKYQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARTAGVGGRLISYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METVO (30S ribosomal protein S8P OS=Methanococcus voltae GN=rps8p PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.464e-24
Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V L G++NKCG + PRF V  +E E +  R LP++ FG ++++T  G+M H+EA+    GG+++ + Y
Sbjct:    7 LANALNHISNCENVGKNTAYLKPASKLIGRVLKVMQDQGYIGNFEYIEDGKAGVYKVTLIGQINKCGAVKPRFAVKNQEFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEAKDSGIGGRLISYIY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METM7 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps8p PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.464e-24
Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V+L G++NKCG + PRF V   + E +  R LP++ FG ++++T  G+M H+EAR    GG+++ + Y
Sbjct:    7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METST (30S ribosomal protein S8P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps8p PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.442e-24
Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L DAL ++ N E +G    +I+P+SK+I   L  MQK  YIG FE VDD +AG   VEL G +NKCGVI PR  V   E E +  R LP++ FG +++TT  G+M H EA+    GG++L + Y
Sbjct:    7 LADALTNIRNNELQGNDSCVIKPASKLIGHVLSTMQKENYIGNFELVDDGKAGIFNVELVGNINKCGVIKPRHAVKNTEFEDYEKRYLPAKNFGILIVTTPQGVMTHHEAKEAGIGGRLLVYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METM6 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps8p PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.442e-24
Identity = 52/124 (41.94%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V+L G++NKCG + PRF V   + E +  R LP++ FG ++++T  G+M H+EAR    GG+++ + Y
Sbjct:    7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRFAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARSAGVGGRLISYIY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_HALSA (30S ribosomal protein S8P OS=Halobacterium salinarium GN=rps8p PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.103e-23
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L+DAL  + NAE  G     + P+S ++   L V    GYI  FE+VD+ +AG+  VEL G +N+CG ++PR+ VG    E W  R LP+R +G +V+TTS GIM H EAR    GG+V+ + Y
Sbjct:    7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_HALS3 (30S ribosomal protein S8P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps8p PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.103e-23
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L+DAL  + NAE  G     + P+S ++   L V    GYI  FE+VD+ +AG+  VEL G +N+CG ++PR+ VG    E W  R LP+R +G +V+TTS GIM H EAR    GG+V+ + Y
Sbjct:    7 LSDALSGIDNAESVGHLTHTVAPASNMVGSVLEVFYDRGYIDGFEFVDNGKAGRFEVELKGAINECGPVNPRYSVGADGFEQWEKRYLPARDYGSLVVTTSHGIMSHYEAREAGIGGQVIAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METMP (30S ribosomal protein S8P OS=Methanococcus maripaludis GN=rps8p PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.440e-23
Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V+L G++NKCG + PR+ V   + E +  R LP++ FG ++++T  G+M H+EAR    GG+++ + Y
Sbjct:    7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METM5 (30S ribosomal protein S8P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps8p PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.440e-23
Identity = 51/124 (41.13%), Postives = 80/124 (64.52%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E  GK    ++P+SK+I + L VMQ  GYIG FEY++D +AG   V+L G++NKCG + PR+ V   + E +  R LP++ FG ++++T  G+M H+EAR    GG+++ + Y
Sbjct:    7 LANALNHVSNCESVGKNVAYLKPASKLIGRVLNVMQDQGYIGNFEYIEDGKAGVYKVDLIGQINKCGAVKPRYAVKNHDFEKFEKRYLPAKGFGLLIVSTPKGLMTHDEARNAGVGGRLISYIY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_HALMA (30S ribosomal protein S8P OS=Haloarcula marismortui GN=rps8p PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.440e-23
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 3
Query:  345 DALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            +AL ++ NAE  G  +  + P+S  I   L V    GYI  F +VDD +AG+  VEL G +N+CG + PR+  G  E E W  R LP+R +G +V+TTS GIM H EAR +  GG+V+ + Y
Sbjct:    9 NALSALNNAESVGHLEQTVSPASNEIGSVLEVFYDRGYIDGFSFVDDGKAGEFEVELKGAINECGPVKPRYSAGADEFEKWEKRFLPARDYGTLVVTTSHGIMSHYEAREQGVGGQVIAYVY 130          
The following BLAST results are available for this feature:
BLAST of EY692975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
RS8_METVA4.949e-2441.9430S ribosomal protein S8P OS=Methanococcus vanniel... [more]
RS8_METVO6.464e-2441.9430S ribosomal protein S8P OS=Methanococcus voltae ... [more]
RS8_METM76.464e-2441.9430S ribosomal protein S8P OS=Methanococcus maripal... [more]
RS8_METST8.442e-2445.9730S ribosomal protein S8P OS=Methanosphaera stadtm... [more]
RS8_METM68.442e-2441.9430S ribosomal protein S8P OS=Methanococcus maripal... [more]
RS8_HALSA1.103e-2343.5530S ribosomal protein S8P OS=Halobacterium salinar... [more]
RS8_HALS31.103e-2343.5530S ribosomal protein S8P OS=Halobacterium salinar... [more]
RS8_METMP1.440e-2341.1330S ribosomal protein S8P OS=Methanococcus maripal... [more]
RS8_METM51.440e-2341.1330S ribosomal protein S8P OS=Methanococcus maripal... [more]
RS8_HALMA1.440e-2343.4430S ribosomal protein S8P OS=Haloarcula marismortu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692975 ID=EY692975; Name=EY692975; organism=Citrus sinensis; type=EST; length=961bp
CCACGCGTCCGGTTCAATATCCAGTGGAGCATCCAGAGAAGTTTGAACAG
TCTCTTGAAGCTCCCGCTTAACATTCTCAAGGCCTCCAATGTCCTCCCAG
CTGACATTGGGAACTTCCACAACAGTTTCACGCAGAGCAGAGGGGTTGCT
TGTCCCAAGTGCAGTTTGGAAGTGCTCATTTGAAACAGCCATGGAATTAA
GAATCTCAGCATCGATGGTTTCATCTTCCAAGTCAATCACATCCATCTTC
TCCCTGATGCATTGCAGCTCACGTACTCTTTCAGAGGCGCCTCTCCCTGC
TTTGATTTGCCTACGCAACAATGGTGAGAGTTAGTGTTCTGAATGACGCT
CTTAAGAGCATGTATAATGCCGAGAAAAGGGGGAAGCGTCAGGTTATGAT
CAGACCATCCTCCAAGGTTATCATTAAGTTTCTTCTGGTGATGCAAAAGC
ACGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGAGCTGGTAAG
ATTGTGGTTGAACTGAACGGAAGATTGAACAAATGTGGGGTTATCAGTCC
CCGTTTTGATGTTGGCGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGC
TTCCCTCAAGACAGTTTGGATACATTGTGCTGACNACTTCTGCTGGCATT
ATGGACCACGAAGAGGCGAGAAGGAAGAAATGTGGTGGTAAAGTGCTTGG
TTTTTTCTACTANGCAAAGTCATATTGAGAATGGGACTTTGAGTTTTGTT
GTGTACTTTGGAAGAAACTTGTCACAATGGGGATAGCTCTCTTNGNNTTA
CTGATTNNATATGCATTNNTAACTCGGATGGGACCCCTTTAGTGAGAAGG
ATGATATTATGTGTACCCCATTATCTCTAGCAGGTGATTTGGGATCATTT
TCCCAGTCTGTAACATCCGATGGGTAATGAGGATATAGTTTATATTTTAT
TTTTTTTGGTA
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