EY692975

Overview
NameEY692975
Unique NameEY692975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.228e-14
Identity = 40/80 (50.00%), Postives = 56/80 (70.00%), Query Frame = -2
Query:   28 LQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQTSLDA 267
            ++ +R  +  IDLE E I  E+L+++ V+ + F+ AL    PSA+RE +VEVPNV WEDIGGLE VK+EL+E V+  L A
Sbjct:  395 MRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKA 474          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.729e-12
Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = -2
Query:    4 LQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQTSLDAP-----LDIEPDA 267
            ++ +R  +  IDL++E I   +++ M V  E F+ AL    PSA+RE +VE+P ++W+D+GGL   K  ++E+V+  L+ P     + +EP A
Sbjct:  405 MRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALSEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPA 497          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.271e-11
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = -2
Query:   31 DVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQTSLD 243
            D +D  +  I A ILN + +  +HFQ AL   NPS+LRE  V++P V+W DIGG+  VK +L+ET+   L+
Sbjct:  885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLE 955          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.660e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = -2
Query:   25 IDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQTSLDAP 237
            ++L+  TI AEI+  + VS   F  AL +  PS LRE  VEVP V+W DIGGL+NVK++L+E V+  L  P
Sbjct:  440 LNLDQPTIPAEIIKELKVSMNDFLNALKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFP 510          
The following BLAST results are available for this feature:
BLAST of EY692975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
Y1156_METJA1.228e-1450.00Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
CDCH_HALSA9.729e-1235.48Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
CDAT_PLAF71.271e-1145.07Putative cell division cycle ATPase OS=Plasmodium ... [more]
SAV_SULAC1.660e-1149.30Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692975 ID=EY692975; Name=EY692975; organism=Citrus sinensis; type=EST; length=961bp
CCACGCGTCCGGTTCAATATCCAGTGGAGCATCCAGAGAAGTTTGAACAG
TCTCTTGAAGCTCCCGCTTAACATTCTCAAGGCCTCCAATGTCCTCCCAG
CTGACATTGGGAACTTCCACAACAGTTTCACGCAGAGCAGAGGGGTTGCT
TGTCCCAAGTGCAGTTTGGAAGTGCTCATTTGAAACAGCCATGGAATTAA
GAATCTCAGCATCGATGGTTTCATCTTCCAAGTCAATCACATCCATCTTC
TCCCTGATGCATTGCAGCTCACGTACTCTTTCAGAGGCGCCTCTCCCTGC
TTTGATTTGCCTACGCAACAATGGTGAGAGTTAGTGTTCTGAATGACGCT
CTTAAGAGCATGTATAATGCCGAGAAAAGGGGGAAGCGTCAGGTTATGAT
CAGACCATCCTCCAAGGTTATCATTAAGTTTCTTCTGGTGATGCAAAAGC
ACGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGAGCTGGTAAG
ATTGTGGTTGAACTGAACGGAAGATTGAACAAATGTGGGGTTATCAGTCC
CCGTTTTGATGTTGGCGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGC
TTCCCTCAAGACAGTTTGGATACATTGTGCTGACNACTTCTGCTGGCATT
ATGGACCACGAAGAGGCGAGAAGGAAGAAATGTGGTGGTAAAGTGCTTGG
TTTTTTCTACTANGCAAAGTCATATTGAGAATGGGACTTTGAGTTTTGTT
GTGTACTTTGGAAGAAACTTGTCACAATGGGGATAGCTCTCTTNGNNTTA
CTGATTNNATATGCATTNNTAACTCGGATGGGACCCCTTTAGTGAGAAGG
ATGATATTATGTGTACCCCATTATCTCTAGCAGGTGATTTGGGATCATTT
TCCCAGTCTGTAACATCCGATGGGTAATGAGGATATAGTTTATATTTTAT
TTTTTTTGGTA
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