EY692975

Overview
NameEY692975
Unique NameEY692975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length961
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.650e-28
Identity = 60/124 (48.39%), Postives = 85/124 (68.55%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E+ GK+   I+P+SK+I + L VMQ HGYIGEFE+++D RAG   VEL G++NKCG I PR+ V   E E +  R LP+R FG ++++TS GIM H EA+ K  GG+++ + Y
Sbjct:    7 LANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQDHGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRLISYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METTH (30S ribosomal protein S8P OS=Methanobacterium thermoautotrophicum GN=rps8p PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.637e-28
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 3
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            M  +  L +AL ++ N E RG  +  I P+SK+I + L  MQK GYIGEFEYVDD RAGK +VEL G +N CGVI PR  V   E E +  R LP++ FG I+++T  GIM H+EA+ +  GG++L + Y
Sbjct:    1 MTLMDPLANALTNIRNNEIRGNVKCRITPASKLIGRVLRTMQKEGYIGEFEYVDDGRAGKFIVELEGNINHCGVIKPRHAVKKDEFEKFEKRYLPAKNFGIIIVSTPEGIMTHKEAKDRGIGGRLLAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.644e-27
Identity = 59/124 (47.58%), Postives = 87/124 (70.16%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L +AL  + N E+ GK+ V I+P+SK+I + L VMQ +GYIGEFE+++D RAG   VEL G++NKCG I PRF V     E +  R LP+R FG ++++T+ G+M HEEA+++  GG++L + Y
Sbjct:    7 LANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRFPVKKFGYEKFEKRYLPARDFGILIVSTTQGVMSHEEAKKRGLGGRLLAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.644e-27
Identity = 60/133 (45.11%), Postives = 87/133 (65.41%), Query Frame = 3
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MV +  L +AL ++YN E RG ++ +I P+SK+I   L +MQK GY+GEFEY+DD R GKI V L GR+NKCG I PR  V  ++   +     R LPS+  G ++++TS G+M H+EA +K+ GG  + + Y
Sbjct:    1 MVMLDTLANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCGAIKPRVSVSYRDLLVLPEHLRRFLPSKDVGILIISTSQGLMTHKEAIQKRVGGIAIAYVY 133          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.662e-27
Identity = 60/133 (45.11%), Postives = 90/133 (67.67%), Query Frame = 3
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MV +  L +AL ++YNAE R K++V++ P+SK+ +  L V+Q+ GYIGEFEY+DD R GKI ++L GR+NK GVI PR+ V  +E+     W  R LP+   G I+++T  G++ H+EA  K+ GG +L + Y
Sbjct:    1 MVVMDTLANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGVIKPRYPVKHRELAEFPEWLKRYLPAYNIGVIIVSTPYGVLSHKEAVEKQTGGVLLAYCY 133          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_PYRKO (30S ribosomal protein S8P OS=Pyrococcus kodakaraensis GN=rps8p PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.783e-27
Identity = 58/130 (44.62%), Postives = 89/130 (68.46%), Query Frame = 3
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            M  +  L +AL  + N+E+ GK++V I+P+SK+I + L VM ++GYIGEFE +DD RAG   V+L G++NK G I PRF V  ++ E W  R LP+ +FG ++++TS G+M H+EA  K  GG+++ + Y
Sbjct:    1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGIYRVQLIGKINKAGAIKPRFPVKARDYEKWEKRFLPAFEFGILIVSTSQGVMTHKEALEKGIGGRLIAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_PYRAE (30S ribosomal protein S8P OS=Pyrobaculum aerophilum GN=rps8p PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.783e-27
Identity = 56/130 (43.08%), Postives = 88/130 (67.69%), Query Frame = 3
Query:  321 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            MV + +L++AL  + NAE  GK+Q +I P +K+    L V+Q++GY+GE EY+DD + GK +V+L G++N  G I PR+ V  +EI  W  + LP+RQ G ++++TS G+M H EA+ +K GG +L + Y
Sbjct:    1 MVMLDILSNALIQIKNAEIVGKKQAVIWPVNKLTYYTLRVLQRYGYVGEIEYIDDGKGGKYIVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILIISTSQGVMSHIEAKERKIGGVLLAYVY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_ARCFU (30S ribosomal protein S8P OS=Archaeoglobus fulgidus GN=rps8p PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.817e-26
Identity = 55/127 (43.31%), Postives = 88/127 (69.29%), Query Frame = 3
Query:  330 VSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            V  L++A+ ++ NAE  G+++  I+P+SK+I   L VM+ +GYI  FEYV++HR GK +VEL+G +N CG I PRF   V E E +  R LP+R FG ++++T+ G+M  ++AR+++ GG +L + Y
Sbjct:    3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.100e-26
Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            L DAL ++ N E + K   +I P+SK+I + L  MQK  YIG FEY+DD+RAG+  VEL G +NKCGVI PR  V   E E +  R LP++ FG +++TT  GIM H EA+ +  GG++L + Y
Sbjct:    7 LADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGVIKPRHAVKKDEFEKFEKRYLPAKNFGILIVTTPEGIMTHYEAKERGIGGRLLAYMY 130          
BLAST of EY692975 vs. ExPASy Swiss-Prot
Match: RS8_THEAC (30S ribosomal protein S8P OS=Thermoplasma acidophilum GN=rps8p PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.049e-26
Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 3
Query:  339 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKKCGGKVLGFFY 710
            LND + S+ NA + GKR+++  P++K+I K L VMQ + YI  FE +D+ R GK  + LN  +N CGVI PRF V  + +E + AR LP+  FG ++LTT+ G+M + EAR+   GGK+L + Y
Sbjct:    6 LNDVINSIKNASRLGKREIIAEPAAKLIGKVLKVMQDYNYIKSFEVIDESRGGKFKIVLNTTINNCGVIKPRFPVKNENLEKYEARYLPAEDFGILILTTTKGVMSNIEARKLGIGGKLLAYVY 129          
The following BLAST results are available for this feature:
BLAST of EY692975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
RS8_METIG5.650e-2848.3930S ribosomal protein S8P OS=Methanococcus igneus ... [more]
RS8_METTH9.637e-2848.4630S ribosomal protein S8P OS=Methanobacterium ther... [more]
RS8_METJA1.644e-2747.5830S ribosomal protein S8P OS=Methanocaldococcus ja... [more]
RS8_IGNH41.644e-2745.1130S ribosomal protein S8P OS=Ignicoccus hospitalis... [more]
RS8_DESK13.662e-2745.1130S ribosomal protein S8P OS=Desulfurococcus kamch... [more]
RS8_PYRKO4.783e-2744.6230S ribosomal protein S8P OS=Pyrococcus kodakaraen... [more]
RS8_PYRAE4.783e-2743.0830S ribosomal protein S8P OS=Pyrobaculum aerophilu... [more]
RS8_ARCFU1.817e-2643.3130S ribosomal protein S8P OS=Archaeoglobus fulgidu... [more]
RS8_METS33.100e-2647.5830S ribosomal protein S8P OS=Methanobrevibacter sm... [more]
RS8_THEAC4.049e-2645.1630S ribosomal protein S8P OS=Thermoplasma acidophi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-006-D10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692975 ID=EY692975; Name=EY692975; organism=Citrus sinensis; type=EST; length=961bp
CCACGCGTCCGGTTCAATATCCAGTGGAGCATCCAGAGAAGTTTGAACAG
TCTCTTGAAGCTCCCGCTTAACATTCTCAAGGCCTCCAATGTCCTCCCAG
CTGACATTGGGAACTTCCACAACAGTTTCACGCAGAGCAGAGGGGTTGCT
TGTCCCAAGTGCAGTTTGGAAGTGCTCATTTGAAACAGCCATGGAATTAA
GAATCTCAGCATCGATGGTTTCATCTTCCAAGTCAATCACATCCATCTTC
TCCCTGATGCATTGCAGCTCACGTACTCTTTCAGAGGCGCCTCTCCCTGC
TTTGATTTGCCTACGCAACAATGGTGAGAGTTAGTGTTCTGAATGACGCT
CTTAAGAGCATGTATAATGCCGAGAAAAGGGGGAAGCGTCAGGTTATGAT
CAGACCATCCTCCAAGGTTATCATTAAGTTTCTTCTGGTGATGCAAAAGC
ACGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGAGCTGGTAAG
ATTGTGGTTGAACTGAACGGAAGATTGAACAAATGTGGGGTTATCAGTCC
CCGTTTTGATGTTGGCGTCAAGGAGATTGAAGGTTGGACTGCTAGGTTGC
TTCCCTCAAGACAGTTTGGATACATTGTGCTGACNACTTCTGCTGGCATT
ATGGACCACGAAGAGGCGAGAAGGAAGAAATGTGGTGGTAAAGTGCTTGG
TTTTTTCTACTANGCAAAGTCATATTGAGAATGGGACTTTGAGTTTTGTT
GTGTACTTTGGAAGAAACTTGTCACAATGGGGATAGCTCTCTTNGNNTTA
CTGATTNNATATGCATTNNTAACTCGGATGGGACCCCTTTAGTGAGAAGG
ATGATATTATGTGTACCCCATTATCTCTAGCAGGTGATTTGGGATCATTT
TCCCAGTCTGTAACATCCGATGGGTAATGAGGATATAGTTTATATTTTAT
TTTTTTTGGTA
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