EY692864

Overview
NameEY692864
Unique NameEY692864
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length938
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_NOSSP (Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain PCC 7906) GN=petC PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.984e-62
Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 2
Query:  257 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            VPDMG+RQ MNLL  G V+      L P   +F PP  G AGGGTTAKD +GND+  + +L     GDR L +GLKGDPTY+VVE  + +  YGINA+CTHLGCVVPWN AENKF CPCHGSQY+  G+VVRGPAPLSLALAHAN  + K++  PWTETDFRTG+APWW
Sbjct:   10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKFLENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDETGKVVRGPAPLSLALAHANTVDDKIILSPWTETDFRTGDAPWW 178          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 9.847e-62
Identity = 107/176 (60.80%), Postives = 130/176 (73.86%), Query Frame = 2
Query:  236 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            T +PA  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL+TH  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQY+  G+VVRGPAPLSLALA+ ++ N  V    WT+TDFRTGE PWW
Sbjct:    2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGNAVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWW 177          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP6 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.286e-61
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 2
Query:  248 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            A  VP MG+RQ MNLL  G+V+      L P   +F PP  G +GGG  AKDA+GND++ + +L  H  GDRTL +GLKGDPTYLVVE  + +  YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+  G+VVRGPAPLSLALAH ++ + KV   PWTETDFRTG+ PWW
Sbjct:    7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWW 178          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus (strain PCC 7942) GN=petC PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.286e-61
Identity = 107/172 (62.21%), Postives = 128/172 (74.42%), Query Frame = 2
Query:  248 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            A  VP MG+RQ MNLL  G+V+      L P   +F PP  G +GGG  AKDA+GND++ + +L  H  GDRTL +GLKGDPTYLVVE  + +  YGINAVCTHLGCVVPWN++ENKF CPCHGSQY+  G+VVRGPAPLSLALAH ++ + KV   PWTETDFRTG+ PWW
Sbjct:    7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVLSKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWW 178          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9311) GN=petC PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.680e-61
Identity = 107/176 (60.80%), Postives = 129/176 (73.30%), Query Frame = 2
Query:  236 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            T +PA  VP MG+RQ MNLL  G+V+      L P A +F PP     GGGT+AKD +GN + A+ WL++H  GDR+L +GLKGDPTYL+VE    + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQY+  G+VVRGPAPLSLALA+ ++ N  V    WTETDFRTGE PWW
Sbjct:    2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGNSVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVDNDNVFVSQWTETDFRTGEKPWW 177          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_MASLA (Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus laminosus GN=petC PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.680e-61
Identity = 105/169 (62.13%), Postives = 126/169 (74.56%), Query Frame = 2
Query:  257 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            VPDMG+RQ MNLL  G V+      L P   +F PP  G+ GGGTTAKD +GN++  + +L +H  GDR L +GLKGDPTY+VVE  + +  YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+  G+V+RGPAPLSLAL HA + +  +V  PWTETDFRTGE PWW
Sbjct:   10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWW 178          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRIB_SYNY3 (Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=petC2 PE=3 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 4.887e-61
Identity = 106/170 (62.35%), Postives = 130/170 (76.47%), Query Frame = 2
Query:  257 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-*NGKVVFVPWTETDFRTGEAPWW 763
            VPD+G+RQ MNLL  G ++      L P   +  PP  G +GGG TAKDA+GND+   ++L +H  GDR L +GLKGDPTY+VV+ D T+A+YGINAVCTHLGCVVPWN++ENKF+CPCHGSQYN +G+VVRGPAPLSLALAHA +  + K+V   WTETDFRT E PWW
Sbjct:   10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEFLASHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWNASENKFMCPCHGSQYNAEGKVVRGPAPLSLALAHATVTDDDKLVLSTWTETDFRTDEDPWW 179          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_PROMM (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9313) GN=petC PE=3 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 6.383e-61
Identity = 106/176 (60.23%), Postives = 127/176 (72.16%), Query Frame = 2
Query:  236 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            T + +  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL  H  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+  + N  V    WTETDFRTGE PWW
Sbjct:    2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_PROM3 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9303) GN=petC PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 6.383e-61
Identity = 106/176 (60.23%), Postives = 127/176 (72.16%), Query Frame = 2
Query:  236 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            T + +  VP MG+RQ MNLL  G+V+      L P   +F PP    +GGGT+AKD +GN + A+ WL  H  GDR+L +GLKGDPTYL+VE D  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQYN+ G+VVRGPAPLSLALA+  + N  V    WTETDFRTGE PWW
Sbjct:    2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGNSVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVNKFVCPCHGSQYNSTGKVVRGPAPLSLALANIAVENDNVFVSQWTETDFRTGEKPWW 177          
BLAST of EY692864 vs. ExPASy Swiss-Prot
Match: UCRI_SYNSC (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9605) GN=petC PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 8.336e-61
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 2
Query:  236 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI*NGKVVFVPWTETDFRTGEAPWW 763
            T + +  VP MG+RQ MNLL  G+V+      L P A +F PP    +GGGT+AKD +GN I A+ WL++H  GDR+L +GLKGDPTYL+VE +  + SYGINA+CTHLGCVVPWNS  NKF+CPCHGSQY++ G+VVRGPAPLSLALA+ ++ N  V    WTETDFRTG+ PWW
Sbjct:    2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGNPITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDSTGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGDKPWW 177          
The following BLAST results are available for this feature:
BLAST of EY692864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
UCRI_NOSSP1.984e-6263.91Cytochrome b6-f complex iron-sulfur subunit OS=Nos... [more]
UCRI_SYNPW9.847e-6260.80Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_SYNP61.286e-6162.21Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_SYNE71.286e-6162.21Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_SYNS31.680e-6160.80Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]
UCRI_MASLA1.680e-6162.13Cytochrome b6-f complex iron-sulfur subunit OS=Mas... [more]
UCRIB_SYNY34.887e-6162.35Cytochrome b6-f complex iron-sulfur subunit 2 OS=S... [more]
UCRI_PROMM6.383e-6160.23Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_PROM36.383e-6160.23Cytochrome b6-f complex iron-sulfur subunit OS=Pro... [more]
UCRI_SYNSC8.336e-6159.66Cytochrome b6-f complex iron-sulfur subunit OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-C06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692864 ID=EY692864; Name=EY692864; organism=Citrus sinensis; type=EST; length=938bp
CCACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTGAAATACAAAGTCT
CACTCGGTTGCCTCCAATAATTCTCCACAATGGCTTCCTCCTCTTCTCTC
TCCTCAGCAACTCCTTCTCAGCTATGCTCAAGCAAGAGTGGTATGTTCTG
TCCATCGAGAGCTTTTCTTGTGAAACCAGCAAGGACCCAGATGGTGACAA
AGAATCCAATGGGAATGAAGATCAAGTGCCAGGCTACAAGTATTCCAGCT
GATAGAGTGCCTGATATGGGCAAGAGGCAGCTCATGAATTTGCTTCTCTT
GGGTGCTGTTTCTCTTCCCACTGGATTTATGTTGGTTCCTTATGCGACCT
TCTTTGCCCCACCTGGTTTAGGAAGTGCTGGTGGTGGTACTACTGCCAAG
GATGCCATTGGCAATGACATCATTGCCGCTGATTGGCTTAACACGCACGG
CCCTGGGGACCGAACCCTCACCGAAGGATTGAAGGGAGATCCAACCTACC
TTGTTGTGGAAAAAGACAAAACACTTGCATCATATGGAATCAATGCTGTC
TGCACTCACCTTGGATGTGTGGTGCCATGGAATTCAGCTGAGAACAAGTT
CATCTGTCCCTGCCACGGATCCCAATACAATAACCAAGGAAGAGTTGTGA
GAGGGCCTGCTCCATTGTCATTGGCATTGGCTCATGCCAACATTTGAAAT
GGTAAGGTAGTCTTCGTTCCATGGACGGAAACAGATTTCAGAACTGGTGA
AGCTCCATGGTGGGGCTAAACTTGNTCCGGGTGCTGTGCTTNNCATATCA
AGTTTTGCCCGTCGGTTTGCTTTGCCGTACTGCATAACATACTGGTACGG
AACATGCTTATCAGATGAAGCTACACATGTAAGCTACTGGGCTGATCATG
CTATCTGGTATCTGGGCAATCTGACATTTTCTCTATCC
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